DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lron-1

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_510424.4 Gene:lron-1 / 181553 WormBaseID:WBGene00008093 Length:607 Species:Caenorhabditis elegans


Alignment Length:403 Identity:91/403 - (22%)
Similarity:148/403 - (36%) Gaps:135/403 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 QLQELILNDNQLIQLDVNAFRG--LHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDAL 257
            |:::|.|.:|.|.....|.|.|  .:.|.||::.||.:..|.......|.||:.|:|..|.::.:
 Worm    83 QIKKLFLRNNGLRSFHPNTFTGNLENSLEELEIRGNYIDGIPQSGVSILKQLKILSLPDNLIEYV 147

  Fly   258 RPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRK 322
            :.|.|       |.....|                  .|..||:|.|::.::.|...:||.:|.:
 Worm   148 QDNAF-------LSYHSRD------------------SLLKLDLSANNLTAIHPTGLLGLENLSQ 187

  Fly   323 LYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLA 387
            |.|..|.:.||.......:.:|:.|.|..|.:..:.....   .||.::.|:|..|:::.:...:
 Worm   188 LSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRNSL---PLPNLKSLSLEVNQIRLIPSDS 249

  Fly   388 FSSLPFLEYLKLGHNELKSLDVRMF---------------------------------------- 412
            ||..|.|.||.||:|.|.|:|..||                                        
 Worm   250 FSETPLLSYLYLGNNLLTSIDASMFLHIGGLKVLSMSNNKDITSIQANGKLSVQQFKLCICILAF 314

  Fly   413 --AP----------------------MRRLQKLHLGHNLLEEINLDVLESLSSVQEI-------- 445
              ||                      ::.:|.:.|..|.:..|:.|...:|..:.|:        
 Worm   315 QHAPSLIRLELFDCSISRIEPKSLQKVQHIQVILLSRNQITRISHDTFSNLPELSELDLSGNSIN 379

  Fly   446 LVD----------------NNRLTFLAKVNVSFPNL---------KRVAIEGNPWQCPCFVKLQH 485
            .||                :|||..|.. ||.:.:|         ::::|:.|||:|.   |...
 Worm   380 AVDDFAFSQLPMLTSLDLSSNRLESLPS-NVIYDSLMQKKTSPVQRKLSIQNNPWRCD---KDLM 440

  Fly   486 WLATRDVVYLRDN 498
            ||..    :||||
 Worm   441 WLRK----WLRDN 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 20/62 (32%)
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380 91/403 (23%)
LRR_RI 194..455 CDD:238064 75/349 (21%)
LRR_8 194..254 CDD:290566 20/60 (33%)
leucine-rich repeat 196..219 CDD:275380 7/24 (29%)
leucine-rich repeat 220..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..267 CDD:275380 6/22 (27%)
LRR_8 271..330 CDD:290566 13/58 (22%)
leucine-rich repeat 272..295 CDD:275380 1/22 (5%)
leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
LRR_8 319..380 CDD:290566 15/60 (25%)
leucine-rich repeat 320..343 CDD:275380 6/22 (27%)
leucine-rich repeat 344..369 CDD:275380 5/24 (21%)
LRR_8 368..428 CDD:290566 23/123 (19%)
leucine-rich repeat 370..393 CDD:275380 5/22 (23%)
leucine-rich repeat 394..417 CDD:275380 13/86 (15%)
leucine-rich repeat 418..441 CDD:275380 6/22 (27%)
lron-1NP_510424.4 PRK15370 <58..>289 CDD:185268 61/233 (26%)
leucine-rich repeat 85..109 CDD:275380 7/23 (30%)
leucine-rich repeat 110..133 CDD:275380 7/22 (32%)
leucine-rich repeat 134..157 CDD:275380 7/29 (24%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..208 CDD:275380 6/22 (27%)
leucine-rich repeat 209..231 CDD:275380 5/24 (21%)
leucine-rich repeat 232..255 CDD:275380 5/22 (23%)
leucine-rich repeat 256..279 CDD:275380 11/22 (50%)
leucine-rich repeat 280..319 CDD:275380 1/38 (3%)
leucine-rich repeat 320..343 CDD:275380 0/22 (0%)
LRR_8 343..402 CDD:338972 10/58 (17%)
leucine-rich repeat 344..367 CDD:275380 6/22 (27%)
leucine-rich repeat 368..391 CDD:275380 3/22 (14%)
leucine-rich repeat 392..410 CDD:275380 5/18 (28%)
leucine-rich repeat 414..435 CDD:275378 5/20 (25%)
LRRCT 431..>472 CDD:214507 11/26 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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