DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lron-7

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001360787.1 Gene:lron-7 / 180991 WormBaseID:WBGene00019351 Length:633 Species:Caenorhabditis elegans


Alignment Length:481 Identity:119/481 - (24%)
Similarity:185/481 - (38%) Gaps:160/481 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LSGCGLVDIRGNHFAPESA---LQRIDFSHNQMELLDRDFFGNLRKLIYANFSHNALKQCDLPHM 172
            |..|.:.:|..:....||.   |:.:|     :.::.:||     :.|.|.|:.|.:        
 Worm   191 LCHCDVHEIDCSEITMESGDPYLRTLD-----VAIMKKDF-----EPITAKFTKNKI-------- 237

  Fly   173 PLLNRLELGHNRLVNATFGVCPQLQELILNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGLET 237
                      :||.|..  |.|:.::.:                    ..|.:|.|.:..|..:.
 Worm   238 ----------SRLQNDK--VLPKFEKFV--------------------SILDVSYNEIRFIDNDV 270

  Fly   238 FQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVS 302
            |:|...|.||.||.|.|..::.:||.|.:| .||  :|||..|||:::.||.|..|::|::|.:.
 Worm   271 FKPFTNLTKLYLSHNVLQTVKKDVFDAAKN-TLH--RLDLGYNRIKVVSDNSFDTLSKLKVLSLD 332

  Fly   303 RNSIASLSPAHFVGLGSLR------------------------KLYLQYNAILEIKPATFAALLN 343
            .|.|.:.....|.||.||.                        ||.|:.|.:.|| ||..|.|.:
 Worm   333 GNPIKAWRKEMFKGLDSLEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEI-PAVVAHLKS 396

  Fly   344 LDTLDLSYNNLEFLEEQIFGGNT-----------------------LPRMRRLNLNGNR-MKHLH 384
            |..:|||..||..:.:..|.|::                       ||:::.|.||.|: ::.||
 Worm   397 LKDIDLSVTNLTEIRDHAFAGDSDLEEIILEKMPFLTVVRDCGFCGLPQLKTLILNDNKYLQELH 461

  Fly   385 PLAFSSLPFLEYLKL--GHNE--LKSLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEI 445
            |.||.      |:|.  ||..  :.||.:               ||          .::|::.|.
 Worm   462 PNAFG------YIKSQPGHKSAAITSLQI---------------HN----------SNISTISEH 495

  Fly   446 LVDNNRLTFLAKVNVSFPNLKRVAIEGNPWQCPC---FVKLQHWLATRDVVYLRDNTGYYKGERP 507
            :||             :.|||...:.||||.|.|   |:..:.:...:|.|..:..:......|.
 Worm   496 MVD-------------YDNLKTFQVGGNPWNCNCDTQFMLEEKFAFKQDSVAPKCTSPAGLNGRL 547

  Fly   508 LCIVTNVDYCIQNLQAVRRLGILGDF 533
            |..|...|.|    :..|.||..|.|
 Worm   548 LVTVRASDAC----EDARFLGRSGRF 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 31/147 (21%)
LRR_8 104..164 CDD:290566 13/55 (24%)
leucine-rich repeat 106..129 CDD:275380 4/17 (24%)
leucine-rich repeat 130..153 CDD:275380 4/22 (18%)
leucine-rich repeat 154..195 CDD:275380 8/40 (20%)
LRR_RI 194..455 CDD:238064 80/312 (26%)
LRR_8 194..254 CDD:290566 13/59 (22%)
leucine-rich repeat 196..219 CDD:275380 0/22 (0%)
leucine-rich repeat 220..243 CDD:275380 6/22 (27%)
leucine-rich repeat 244..267 CDD:275380 10/22 (45%)
LRR_8 271..330 CDD:290566 24/82 (29%)
leucine-rich repeat 272..295 CDD:275380 10/22 (45%)
leucine-rich repeat 296..319 CDD:275380 7/22 (32%)
LRR_8 319..380 CDD:290566 26/108 (24%)
leucine-rich repeat 320..343 CDD:275380 11/46 (24%)
leucine-rich repeat 344..369 CDD:275380 9/47 (19%)
LRR_8 368..428 CDD:290566 18/64 (28%)
leucine-rich repeat 370..393 CDD:275380 9/23 (39%)
leucine-rich repeat 394..417 CDD:275380 6/26 (23%)
leucine-rich repeat 418..441 CDD:275380 2/22 (9%)
lron-7NP_001360787.1 LRR <251..464 CDD:227223 65/236 (28%)
leucine-rich repeat 253..276 CDD:275380 6/42 (14%)
leucine-rich repeat 277..300 CDD:275380 10/22 (45%)
leucine-rich repeat 302..325 CDD:275380 12/24 (50%)
leucine-rich repeat 326..349 CDD:275380 7/22 (32%)
leucine-rich repeat 350..373 CDD:275380 1/22 (5%)
leucine-rich repeat 374..396 CDD:275380 10/22 (45%)
leucine-rich repeat 397..420 CDD:275380 8/22 (36%)
leucine-rich repeat 421..445 CDD:275380 1/23 (4%)
leucine-rich repeat 446..470 CDD:275380 10/29 (34%)
LRRCT 510..557 CDD:214507 12/46 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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