DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and lron-2

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_505402.1 Gene:lron-2 / 179309 WormBaseID:WBGene00022789 Length:575 Species:Caenorhabditis elegans


Alignment Length:582 Identity:135/582 - (23%)
Similarity:212/582 - (36%) Gaps:185/582 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PILHGADLCQPIGWRNFQ--CSEVASLQDLVDLGAENWHTLAIRNVQTELEVGSGE--------- 74
            |.|.||..|.|..:....  |....|||:            ||:.:|...::....         
 Worm    20 PALSGACRCAPSVYEPVAIICQNAGSLQN------------AIQAIQAARDIPIDSLTILDTAIP 72

  Fly    75 ----NADHLANLLDLDLTGAAPINVHTNGFS--ILPNLRQLNLSGCGLVDIRGNHFAPESALQRI 133
                ||.....:|.|.|......|:....|:  :|.:|.:|:|:...|..|      |::.:.|:
 Worm    73 TIPANAFQSFTILRLVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNNLGQI------PQTGIPRL 131

  Fly   134 DFSHNQMELLDRDFFGNLRKLIYAN---------FSHNALKQCDLPHMPLLNRLELGHNRLVNAT 189
                           .||||| |.|         .:.||.:..|     ||.:|||..|||.:||
 Worm   132 ---------------RNLRKL-YLNRNRINQLSSTAFNAFESRD-----LLLKLELAGNRLTDAT 175

  Fly   190 FGVCPQLQELILNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSI-----------------GLET 237
            .|                  |...||.|..|.||.|..|.|:||                 ||.:
 Worm   176 LG------------------DATVFRPLTLLQELSLETNSLTSIPSSALVNQRNTLTNLNLGLNS 222

  Fly   238 FQ--PLAQ-----LRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLAR 295
            ..  |:..     |..|:|..|.:..:.|..|..|.|    ||.|.::||:........||.:.:
 Worm   223 INEVPVGALDFPVLSSLSLEFNGITVIPPQAFQGVPN----LQFLYMTGNKFPSWAPEMFRYITQ 283

  Fly   296 LQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQ 360
            |:.|.:....|:.:....|:.:.:|.:|.:...|:..|:...|.....:..:.|:.|.|..:...
 Worm   284 LKTLGIGETPISVIPNNAFMHIPNLIRLEMSEAAVDTIERGAFQRTPQIQAIVLNKNRLSQVRAD 348

  Fly   361 IFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLGH 425
            .|.|  |..:..::|.|||:.::.||.|::||.:.:|.:.:|.|:::...:|             
 Worm   349 FFEG--LNDLYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVF------------- 398

  Fly   426 NLLEEINLDVLESLSSVQEILVDNNRLTFLAKVNVSFPNLKRVAIE-GNPWQCPCFVKLQHWLAT 489
                                     :.:||.:     ||.:||... ||||.|...::   |..|
 Worm   399 -------------------------QNSFLPQ-----PNDRRVIYACGNPWYCNSELE---WFRT 430

  Fly   490 RDVVYLRDNTGYYKGERPLCI----------------VTNVDYCIQNLQAV----RRLGILG 531
                .||||.. ...|:|.|.                :.:||:|..|.:|.    |.|.::|
 Worm   431 ----LLRDNLD-IDVEKPGCTAVCTSSPNGCPVEGTPLRSVDFCQNNEEAQPLVGRALSMVG 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 48/185 (26%)
LRR_8 104..164 CDD:290566 15/68 (22%)
leucine-rich repeat 106..129 CDD:275380 6/22 (27%)
leucine-rich repeat 130..153 CDD:275380 3/22 (14%)
leucine-rich repeat 154..195 CDD:275380 17/49 (35%)
LRR_RI 194..455 CDD:238064 58/284 (20%)
LRR_8 194..254 CDD:290566 19/83 (23%)
leucine-rich repeat 196..219 CDD:275380 4/22 (18%)
leucine-rich repeat 220..243 CDD:275380 11/41 (27%)
leucine-rich repeat 244..267 CDD:275380 7/22 (32%)
LRR_8 271..330 CDD:290566 13/58 (22%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 4/22 (18%)
LRR_8 319..380 CDD:290566 14/60 (23%)
leucine-rich repeat 320..343 CDD:275380 5/22 (23%)
leucine-rich repeat 344..369 CDD:275380 6/24 (25%)
LRR_8 368..428 CDD:290566 13/59 (22%)
leucine-rich repeat 370..393 CDD:275380 8/22 (36%)
leucine-rich repeat 394..417 CDD:275380 4/22 (18%)
leucine-rich repeat 418..441 CDD:275380 0/22 (0%)
lron-2NP_505402.1 leucine-rich repeat 64..84 CDD:275380 2/19 (11%)
leucine-rich repeat 85..109 CDD:275380 6/23 (26%)
LRR_8 86..144 CDD:290566 19/79 (24%)
LRR_RI 109..294 CDD:238064 60/233 (26%)
leucine-rich repeat 110..133 CDD:275380 7/43 (16%)
LRR_8 132..198 CDD:290566 30/89 (34%)
leucine-rich repeat 134..157 CDD:275380 8/23 (35%)
leucine-rich repeat 161..187 CDD:275380 14/43 (33%)
leucine-rich repeat 188..211 CDD:275380 8/22 (36%)
LRR_8 212..270 CDD:290566 16/61 (26%)
leucine-rich repeat 213..235 CDD:275380 3/21 (14%)
leucine-rich repeat 236..259 CDD:275380 7/22 (32%)
leucine-rich repeat 260..283 CDD:275380 7/22 (32%)
LRR_8 282..342 CDD:290566 11/59 (19%)
leucine-rich repeat 284..307 CDD:275380 4/22 (18%)
leucine-rich repeat 308..355 CDD:275380 11/48 (23%)
LRR_8 330..390 CDD:290566 17/61 (28%)
leucine-rich repeat 356..377 CDD:275380 7/20 (35%)
leucine-rich repeat 380..400 CDD:275380 4/57 (7%)
Ca_hom_mod <481..>504 CDD:291464 3/7 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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