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Protein Alignment CG6749 and ZK546.2

DIOPT Version :9

Sequence 1:	NP_648354.1	Gene:	CG6749 / 39144	FlyBaseID:	FBgn0036040	Length:	552	Species:	Drosophila melanogaster
Sequence 2:	NP_740983.2	Gene:	ZK546.2 / 173855	WormBaseID:	WBGene00022759	Length:	485	Species:	Caenorhabditis elegans

Alignment Length:	413	Identity:	100/413 - (24%)
Similarity:	171/413 - (41%)	Gaps:	106/413 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   128 SALQRIDFSHNQMELLDRDFFGNLRKLIYANFSHNALKQC-DLPHMPLLNRLELGHNRLVNATFG 191
            |.|:.::.|.||:|.|..: ..:|..|...|.|.|.|.:. ||.....|..:|...|:.:....|
Worm    64 SHLKNLNLSRNQLESLPLE-INSLACLEVLNVSQNKLTELPDLSQCVSLKTVEAIENQFIIFPAG 127

  Fly   192 V--CPQLQELILNDNQLIQL--DVNAFRGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQN 252
            |  ||.|:..:|.:|::.:|  ::::.|.    :.:.|:.|||.|:.........:||.:|:..|
Worm   128 VCKCPNLETCLLTENRIEKLPDEIHSLRA----ISVILNKNRLLSLNTANLLRCERLRAVNVDDN 188

  Fly   253 ALDALRPNVFGAVQNFVLH--------------------LQQLDLSGNRIRLLFDNQFRVLAR-- 295
            .|:.      ..::.|:::                    ||::....::.:.:.||..:::.:
Worm   189 QLNR------DEIEQFLVNAPREIRISFERNVSQMHTTDLQEMGNDSSKTKSIGDNARKIIGKSG 247

  Fly   296 ---------------------------------------LQMLDVSRNSIASLSPAHFVG-LGSL 320
                                                   |:.|::|.|.|..: |. |:| ...|
Worm   248 PSTSTVNKHLEMASKSRILQLKGTGLKKVPDEIEPLADVLRNLELSENKIREI-PI-FIGQFSQL 310

  Fly   321 RKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQIFGGNTLP----------------- 368
            ::|:|..|. ||..|....::..|:.|:|:.|.|:.|.:.|.|...|.
Worm   311 KQLHLANNC-LEFLPDELGSMKKLEILNLAGNKLKALPDTIVGCTDLKTIDLSSNVFTVFPVAVI 374

  Fly   369 ---RMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLGHNLLE- 429
               ::..||||||:::.| |...|:|..:| |.|..|.|.||:....|...||:.|.|..|.||
Worm   375 GCLQLDILNLNGNQIESL-PDDISNLKVIE-LSLNQNRLSSLNPSNLAKTTRLRTLRLDENCLEK 437

  Fly   430 -EINLDVLESLSSVQEILVDNNR 451
             |...|:||| |::..:..|.||
Worm   438 SEFTRDLLES-STISVMSYDGNR 459

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.