DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and egg-6

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_492348.1 Gene:egg-6 / 172670 WormBaseID:WBGene00010621 Length:961 Species:Caenorhabditis elegans


Alignment Length:437 Identity:106/437 - (24%)
Similarity:181/437 - (41%) Gaps:75/437 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PIGWRNFQCSEVASLQDLVDLGAENWHTLAIRNVQTELEVGSGENADHLANLLDLDLTGAAPINV 95
            |..||:.:    |:::.:...|.|         ::|....|      :|:.|:.::|......::
 Worm    96 PTAWRHVE----ATIEHITINGNE---------LKTVPVFG------NLSTLMSMNLNSNQISSI 141

  Fly    96 HTNGFSILPNLRQLNLSGCGLVDIRGNHFAPES------ALQRIDFSHNQMELLDRDFFGNLRKL 154
            ....|:.|..|.||.|....:.|     |.|:|      :|..:|.|.|.::.:......|...|
 Worm   142 PDKAFNGLSALTQLRLENNAICD-----FPPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANL 201

  Fly   155 IYANFSHNALKQC---DLPHMPLLNRLELGHN---RLVNATFGVCPQLQELILNDNQLIQLDVNA 213
            :|.:...|.:.:.   :|.::|.|..|.:.:|   |:....|...||||.|.|.||.:..||.|.
 Worm   202 MYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNR 266

  Fly   214 FRGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLS 278
            .:|...|..|.:|.|.|  ..|.:.:.|..|:::.:..|.:..:....|....|    ||.:.:.
 Worm   267 LQGFKNLEVLDVSNNAL--YALPSLKDLPNLKQVRVDGNLITKIETLAFSNNPN----LQLISVQ 325

  Fly   279 GNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLN 343
            .|.|..:..|.|..|.:|.:|.|..||:|.:....|.|:.:|::|.::.|.:..:..::||.|.:
 Worm   326 NNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAH 390

  Fly   344 LDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLD 408
            |.||||.:|.:..:||.                          .|..|..|.:|.|.:|::....
 Worm   391 LTTLDLGHNKIHDIEEG--------------------------TFDKLSKLFWLDLSNNKISGFK 429

  Fly   409 VRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFL 455
            ..:|       |..:.:.||:...|...||.:.....|:.|...|||
 Worm   430 TSVF-------KKKISNILLDGNQLICDESFNEFLTYLIANKVRTFL 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 45/164 (27%)
LRR_8 104..164 CDD:290566 16/65 (25%)
leucine-rich repeat 106..129 CDD:275380 8/28 (29%)
leucine-rich repeat 130..153 CDD:275380 5/22 (23%)
leucine-rich repeat 154..195 CDD:275380 10/46 (22%)
LRR_RI 194..455 CDD:238064 68/260 (26%)
LRR_8 194..254 CDD:290566 21/59 (36%)
leucine-rich repeat 196..219 CDD:275380 10/22 (45%)
leucine-rich repeat 220..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..267 CDD:275380 3/22 (14%)
LRR_8 271..330 CDD:290566 18/58 (31%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
LRR_8 319..380 CDD:290566 14/60 (23%)
leucine-rich repeat 320..343 CDD:275380 6/22 (27%)
leucine-rich repeat 344..369 CDD:275380 8/24 (33%)
LRR_8 368..428 CDD:290566 8/59 (14%)
leucine-rich repeat 370..393 CDD:275380 2/22 (9%)
leucine-rich repeat 394..417 CDD:275380 5/22 (23%)
leucine-rich repeat 418..441 CDD:275380 6/22 (27%)
egg-6NP_492348.1 LRR_8 107..162 CDD:290566 13/69 (19%)
leucine-rich repeat 107..127 CDD:275380 5/34 (15%)
leucine-rich repeat 128..151 CDD:275380 4/22 (18%)
LRR_RI <144..281 CDD:238064 40/141 (28%)
leucine-rich repeat 152..200 CDD:275380 13/52 (25%)
LRR_8 176..233 CDD:290566 12/56 (21%)
leucine-rich repeat 201..224 CDD:275380 4/22 (18%)
LRR_8 225..283 CDD:290566 21/57 (37%)
leucine-rich repeat 225..248 CDD:275380 5/22 (23%)
LRR_RI <240..458 CDD:238064 66/256 (26%)
leucine-rich repeat 249..272 CDD:275380 10/22 (45%)
LRR_8 271..329 CDD:290566 14/63 (22%)
leucine-rich repeat 273..294 CDD:275380 7/22 (32%)
leucine-rich repeat 295..318 CDD:275380 3/22 (14%)
LRR_8 317..375 CDD:290566 18/61 (30%)
leucine-rich repeat 319..342 CDD:275380 7/22 (32%)
leucine-rich repeat 343..366 CDD:275380 8/22 (36%)
LRR_8 365..425 CDD:290566 20/85 (24%)
leucine-rich repeat 367..390 CDD:275380 6/22 (27%)
leucine-rich repeat 391..414 CDD:275380 10/48 (21%)
leucine-rich repeat 415..434 CDD:275380 5/25 (20%)
leucine-rich repeat 437..449 CDD:275378 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.