DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lron-9

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001076615.1 Gene:lron-9 / 172529 WormBaseID:WBGene00011971 Length:653 Species:Caenorhabditis elegans


Alignment Length:490 Identity:109/490 - (22%)
Similarity:204/490 - (41%) Gaps:104/490 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 CSEVASLQDLVDLGAENWHTLAI---RNVQTELEVGS---GENADHL---------ANLLDLDLT 88
            |.::..|::..||..::.:.|.:   :....|..|.|   |.|.|||         |:|:     
 Worm    24 CPDLDVLENQSDLSQDDLNNLILCFCKPDDKEKVVISCLYGSNLDHLMKATEAVKNASLI----- 83

  Fly    89 GAAPINVHTNGF---------SILPNLRQLNLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLD 144
             .:.|::....|         .:.|:|:.|.:..|.                    ..:::::.|
 Worm    84 -TSSISIQHMEFPDGGLPEFGKLAPDLKSLEIKECS--------------------GQDELKVGD 127

  Fly   145 RDFFG---NLRKLIYANFSHNALKQCDLPHM-PLLNRLELGHNRLVNATFGVCPQLQELILNDNQ 205
            ..|.|   .||.|        .:..|:|..: |.::.||               .|:.::.::|:
 Worm   128 DSFKGLEQTLRNL--------TIHACNLQTIPPSVDSLE---------------NLETVVFSNNK 169

  Fly   206 LIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQN------------------ 252
            |..|.|:.|:....|..|.:|||.::||..:.|:||..|..|.:.::                  
 Worm   170 LDSLGVDQFKNKKQLSYLDVSGNFITSIEEKAFEPLTSLETLVIGEHNFINETVVEEIGRLKALK 234

  Fly   253 ALDALRPN-VFGAVQNFVLHLQQLD---LSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAH 313
            .||..|.: :|...:.....:.|::   |||..|..|...||..|.:|:.||:..|.|.:::...
 Worm   235 TLDLSRADGIFQPPETLFKEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENITAYA 299

  Fly   314 FVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLNGN 378
            |.||.||.:|.|..|.|.:::|..|..|.:|:.|||.:|.::.:...:|...| .:::.::|..|
 Worm   300 FDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIPTDVFKPLT-DKLKTISLRNN 363

  Fly   379 RMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLGHNLLEEINLDVLES-LSSV 442
            .:..   |..:.|..||.|.|......|:.........:|::|.|....:..|..:..|: ..|:
 Worm   364 PISE---LPSTGLGMLEKLSLAECGFTSISADQLKDYPKLEELDLSKCNISNIVENTFENQKDSL 425

  Fly   443 QEILVDNNRLTFLAKVNVSFPNLKRVAIEGNPWQC 477
            :::.:..|:|..|..:..:.|.::.:.:..||::|
 Worm   426 KKLNLQKNKLKSLPNLIKNLPAIESLDVSSNPYRC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 34/174 (20%)
LRR_8 104..164 CDD:290566 10/62 (16%)
leucine-rich repeat 106..129 CDD:275380 3/22 (14%)
leucine-rich repeat 130..153 CDD:275380 4/25 (16%)
leucine-rich repeat 154..195 CDD:275380 6/41 (15%)
LRR_RI 194..455 CDD:238064 72/283 (25%)
LRR_8 194..254 CDD:290566 18/77 (23%)
leucine-rich repeat 196..219 CDD:275380 6/22 (27%)
leucine-rich repeat 220..243 CDD:275380 10/22 (45%)
leucine-rich repeat 244..267 CDD:275380 6/41 (15%)
LRR_8 271..330 CDD:290566 22/61 (36%)
leucine-rich repeat 272..295 CDD:275380 9/25 (36%)
leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
LRR_8 319..380 CDD:290566 18/60 (30%)
leucine-rich repeat 320..343 CDD:275380 8/22 (36%)
leucine-rich repeat 344..369 CDD:275380 7/24 (29%)
LRR_8 368..428 CDD:290566 12/59 (20%)
leucine-rich repeat 370..393 CDD:275380 4/22 (18%)
leucine-rich repeat 394..417 CDD:275380 5/22 (23%)
leucine-rich repeat 418..441 CDD:275380 5/23 (22%)
lron-9NP_001076615.1 leucine-rich repeat 137..159 CDD:275380 8/44 (18%)
LRR_8 159..217 CDD:290566 18/57 (32%)
leucine-rich repeat 160..183 CDD:275380 6/22 (27%)
leucine-rich repeat 184..207 CDD:275380 10/22 (45%)
leucine-rich repeat 208..232 CDD:275380 2/23 (9%)
LRR_8 233..292 CDD:290566 17/58 (29%)
leucine-rich repeat 233..257 CDD:275380 4/23 (17%)
LRR_RI 234..456 CDD:238064 56/225 (25%)
leucine-rich repeat 258..281 CDD:275380 8/22 (36%)
LRR_8 280..340 CDD:290566 22/59 (37%)
leucine-rich repeat 282..305 CDD:275380 8/22 (36%)
leucine-rich repeat 306..329 CDD:275380 8/22 (36%)
LRR_8 328..410 CDD:290566 19/85 (22%)
leucine-rich repeat 330..375 CDD:275380 11/48 (23%)
leucine-rich repeat 376..399 CDD:275380 5/22 (23%)
LRR_8 398..457 CDD:290566 10/58 (17%)
leucine-rich repeat 400..420 CDD:275380 4/19 (21%)
leucine-rich repeat 425..447 CDD:275380 3/21 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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