DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and LINGO2

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001245211.1 Gene:LINGO2 / 158038 HGNCID:21207 Length:606 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
LINGO2NP_001245211.1 LRRNT 27..60 CDD:214470
leucine-rich repeat 39..57 CDD:275380
LRR 1 58..79
leucine-rich repeat 59..82 CDD:275380
LRR_8 60..117 CDD:316378
LRR 2 82..103
leucine-rich repeat 83..106 CDD:275380
LRR_8 106..165 CDD:316378
LRR 3 106..127
leucine-rich repeat 107..130 CDD:275380
LRR 4 130..151
leucine-rich repeat 131..154 CDD:275380
LRR_5 146..276 CDD:331043
LRR 5 154..175
leucine-rich repeat 155..178 CDD:275380
LRR 6 178..199
leucine-rich repeat 179..202 CDD:275380
LRR 7 202..223
leucine-rich repeat 203..250 CDD:275380
LRR 8 226..247
LRR_8 250..309 CDD:316378
LRR 9 250..271
leucine-rich repeat 251..274 CDD:275380
LRR 10 274..295
leucine-rich repeat 275..298 CDD:275380
LRR_8 298..357 CDD:316378
LRR 11 298..319
leucine-rich repeat 299..322 CDD:275380
LRR 12 322..343
leucine-rich repeat 323..343 CDD:275380
PCC 327..>391 CDD:188093
I-set 410..500 CDD:254352
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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