DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and SLITRK4

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001171678.1 Gene:SLITRK4 / 139065 HGNCID:23502 Length:837 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
SLITRK4NP_001171678.1 LRR 1 60..81
leucine-rich repeat 63..84 CDD:275380
LRR_8 83..143 CDD:316378
LRR 2 84..105
leucine-rich repeat 85..108 CDD:275380
LRR 3 108..129
leucine-rich repeat 109..132 CDD:275380
LRR_8 132..190 CDD:316378
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275380
LRR 5 156..177
leucine-rich repeat 157..179 CDD:275380
LRR 6 179..200
leucine-rich repeat 180..204 CDD:275380
leucine-rich repeat 205..295 CDD:275380
LRRCT 213..>253 CDD:214507
leucine-rich repeat 296..371 CDD:275380
leucine-rich repeat 372..402 CDD:275380
LRR 7 378..399
LRR_8 402..461 CDD:316378
LRR 8 402..423
leucine-rich repeat 403..426 CDD:275380
LRR 9 426..447
leucine-rich repeat 427..450 CDD:275380
LRR 10 450..471
leucine-rich repeat 451..472 CDD:275380
LRR 11 474..495
leucine-rich repeat 475..496 CDD:275380
LRR 12 497..518
leucine-rich repeat 498..522 CDD:275380
PCC 502..>563 CDD:188093
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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