DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and LRIG3

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_700356.2 Gene:LRIG3 / 121227 HGNCID:30991 Length:1119 Species:Homo sapiens


Alignment Length:429 Identity:122/429 - (28%)
Similarity:199/429 - (46%) Gaps:46/429 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 HLANLLDLDLTGAAPINVHTNGFSILPNL-------RQLNLSGCGLVDIRGNHFAPESALQRIDF 135
            ||.:|.:        :.::.|....:|||       ..|:|:|..:|:|...|.....:|:.:|.
Human    96 HLQSLRE--------VKLNNNELETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDL 152

  Fly   136 SHNQMELLDRDFFGNLRKLIYANFSHNALKQCDLPHMPLLNR----LELGHNRL--VNATFGVCP 194
            |.|.:..|...|.....|.:|.|  .|.:...:..:...|..    |:|..||:  :.......|
Human   153 SSNNISELQTAFPALQLKYLYLN--SNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFKLP 215

  Fly   195 QLQELILNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRP 259
            |||.|.||.|::..:|...|:||..|..|::..|.::.:....|..|:.:..|.|..|.|..:..
Human   216 QLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITK 280

  Fly   260 N-VFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKL 323
            . ::|     :|.||:|.||.|.|..:..:.:....:|..||::.|.::.|..:.|:||..|..|
Human   281 GWLYG-----LLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTL 340

  Fly   324 YLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQIFGG-NTLPRMRRLNLNGNRMKHLHPLA 387
            ::..|.:..|....|..|.:|.||||..|.:.:..|.:.|. :.|.::|||.|.|||::.:...|
Human   341 HIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKA 405

  Fly   388 FSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLG-HNLLEEINLDVLESLSSVQEILVDNNR 451
            |:.|..||:|.|..|.:.||....|:.|::||:|||. .:||.:..|..|      .:.:.:|| 
Human   406 FTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCDCQLKWL------PQWVAENN- 463

  Fly   452 LTFLAKVNVS--FPNLKR----VAIEGNPWQCPCFVKLQ 484
              |.:.||.|  .|.|.:    .|:..:.:.|..|.|.|
Human   464 --FQSFVNASCAHPQLLKGRSIFAVSPDGFVCDDFPKPQ 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 45/165 (27%)
LRR_8 104..164 CDD:290566 19/66 (29%)
leucine-rich repeat 106..129 CDD:275380 7/29 (24%)
leucine-rich repeat 130..153 CDD:275380 6/22 (27%)
leucine-rich repeat 154..195 CDD:275380 8/46 (17%)
LRR_RI 194..455 CDD:238064 83/263 (32%)
LRR_8 194..254 CDD:290566 20/59 (34%)
leucine-rich repeat 196..219 CDD:275380 10/22 (45%)
leucine-rich repeat 220..243 CDD:275380 5/22 (23%)
leucine-rich repeat 244..267 CDD:275380 5/23 (22%)
LRR_8 271..330 CDD:290566 18/58 (31%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
LRR_8 319..380 CDD:290566 21/61 (34%)
leucine-rich repeat 320..343 CDD:275380 6/22 (27%)
leucine-rich repeat 344..369 CDD:275380 9/25 (36%)
LRR_8 368..428 CDD:290566 24/60 (40%)
leucine-rich repeat 370..393 CDD:275380 10/22 (45%)
leucine-rich repeat 394..417 CDD:275380 9/22 (41%)
leucine-rich repeat 418..441 CDD:275380 9/23 (39%)
LRIG3NP_700356.2 LRR 20..395 CDD:227223 85/313 (27%)
leucine-rich repeat 58..74 CDD:275378
LRR_RI <65..>245 CDD:238064 41/158 (26%)
LRR 1 75..96 122/429 (28%)
leucine-rich repeat 78..99 CDD:275378 2/2 (100%)
LRR 2 99..120 5/28 (18%)
leucine-rich repeat 100..115 CDD:275378 2/22 (9%)
LRR 3 122..142 6/19 (32%)
leucine-rich repeat 123..146 CDD:275378 6/22 (27%)
LRR 4 146..167 6/20 (30%)
leucine-rich repeat 147..168 CDD:275380 6/20 (30%)
LRR 5 168..189 4/22 (18%)
leucine-rich repeat 169..192 CDD:275380 5/24 (21%)
LRR 6 193..214 4/20 (20%)
leucine-rich repeat 194..216 CDD:275380 4/21 (19%)
LRR 7 216..237 9/20 (45%)
leucine-rich repeat 217..240 CDD:275380 10/22 (45%)
LRR 8 240..261 4/20 (20%)
leucine-rich repeat 241..264 CDD:275380 5/22 (23%)
LRR_RI 262..>446 CDD:238064 61/188 (32%)
LRR 9 264..285 4/20 (20%)
leucine-rich repeat 265..288 CDD:275380 5/27 (19%)
LRR 10 288..309 7/20 (35%)
leucine-rich repeat 289..312 CDD:275380 7/22 (32%)
LRR 11 312..333 6/20 (30%)
leucine-rich repeat 313..336 CDD:275380 8/22 (36%)
LRR 12 336..357 5/20 (25%)
leucine-rich repeat 337..360 CDD:275380 6/22 (27%)
LRR 13 360..382 8/21 (38%)
leucine-rich repeat 361..385 CDD:275380 8/23 (35%)
LRR_8 387..442 CDD:290566 23/54 (43%)
LRR 14 387..408 9/20 (45%)
leucine-rich repeat 388..411 CDD:275380 10/22 (45%)
LRR 15 411..432 8/20 (40%)
leucine-rich repeat 412..435 CDD:275380 9/22 (41%)
LRRCT 446..494 CDD:214507 13/56 (23%)
Ig_3 498..585 CDD:290638 2/3 (67%)
I-set 499..599 CDD:254352 1/2 (50%)
I-set 603..693 CDD:254352
Ig_1 620..694 CDD:143240
I-set 697..784 CDD:254352
IGc2 711..774 CDD:197706
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1073..1093
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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