DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lrriq4

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_031758114.1 Gene:lrriq4 / 108644471 XenbaseID:XB-GENE-948455 Length:596 Species:Xenopus tropicalis


Alignment Length:502 Identity:125/502 - (24%)
Similarity:205/502 - (40%) Gaps:132/502 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LDLTGAAPINVHTNGFSILP-------NLRQLNLSGCGLVDIRGNHFAPE----SALQRIDFSHN 138
            |||.....:::..|...::|       |::.|.|:...:     .|...|    ..|||:|.|.|
 Frog    81 LDLEALEELHLDNNRIEVIPKEICHLRNIKVLYLNNNNI-----THVCEELGELQNLQRLDLSFN 140

  Fly   139 QMELLDRDFFGNLR-----KLIYANFSHNALKQCDLPHMPLLNRLELGHNRLVNATFGVCP---- 194
            .:|....:....::     :|..||.....:..|:  .:..|..|.|.:|.|::     .|    
 Frog   141 PLEYDSLNIVSKVQHLRELRLYSANLEELPVAICN--SLQCLELLGLSNNHLMS-----LPEETV 198

  Fly   195 ---QLQELILNDNQL---------------IQLDVNAFR-------GLHGLLELQLSGNRLSSIG 234
               ||:|:.|.:|:|               |.|:.||.:       .|..||:|.|..|.:|.|.
 Frog   199 KLVQLKEIYLQNNKLENFPMELCLLPNLEIIDLERNALKAIPAEIGSLSKLLKLFLGFNSISVIP 263

  Fly   235 LETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQ------QLDLSGNRIRLLFDNQFRVL 293
                :.|::..||    :||||..    ..:||.:.||:      :|.||||.:. .|.::...|
 Frog   264 ----KSLSRCTKL----SALDASN----NCLQNIIPHLRKLTELNELALSGNELG-EFPSKLCKL 315

  Fly   294 ARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLE 358
            :.|.:|.: :|:...:.|:....|..:|.|.|..|.:.|| |.....|..|:.|.|..|::..:.
 Frog   316 SSLSVLYL-KNTAIKMLPSDLSNLSYIRVLDLSQNLLTEI-PPVICTLKQLEILSLDDNHISLII 378

  Fly   359 EQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNE---LKSLDVRMFAPMRRLQK 420
            .:|   ..|.::..|.|.|||.... |.....|..||.|.:|.::   |..|...: ..::.|::
 Frog   379 PEI---KELTQLNYLGLTGNRFTGF-PEEICLLESLERLYIGQDQGTRLAHLSENI-CMLKNLKE 438

  Fly   421 LHLGHNLLEEI--------NLDVLE--------------SLSSVQEILVDNNRLTFLAKVNVSFP 463
            |::.:|.||.:        ||.:|:              ||.::|::|:.||||:.|.......|
 Frog   439 LYIENNNLECLPSNISCLQNLIILDCRNNLLKQLPEGICSLQALQKLLLQNNRLSVLPDKLDLLP 503

  Fly   464 NLKRVAIEGNPWQCP----C--------------------FVKLQHW 486
            .|:.:|:||||...|    |                    .||:|.|
 Frog   504 KLELLALEGNPMTDPPAELCSLGRLAIWHFLQERRRKNALAVKIQAW 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 46/197 (23%)
LRR_8 104..164 CDD:290566 16/75 (21%)
leucine-rich repeat 106..129 CDD:275380 4/26 (15%)
leucine-rich repeat 130..153 CDD:275380 7/27 (26%)
leucine-rich repeat 154..195 CDD:275380 10/47 (21%)
LRR_RI 194..455 CDD:238064 85/320 (27%)
LRR_8 194..254 CDD:290566 22/88 (25%)
leucine-rich repeat 196..219 CDD:275380 10/44 (23%)
leucine-rich repeat 220..243 CDD:275380 8/22 (36%)
leucine-rich repeat 244..267 CDD:275380 6/22 (27%)
LRR_8 271..330 CDD:290566 18/64 (28%)
leucine-rich repeat 272..295 CDD:275380 8/28 (29%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
LRR_8 319..380 CDD:290566 18/60 (30%)
leucine-rich repeat 320..343 CDD:275380 8/22 (36%)
leucine-rich repeat 344..369 CDD:275380 6/24 (25%)
LRR_8 368..428 CDD:290566 16/62 (26%)
leucine-rich repeat 370..393 CDD:275380 7/22 (32%)
leucine-rich repeat 394..417 CDD:275380 6/25 (24%)
leucine-rich repeat 418..441 CDD:275380 10/44 (23%)
lrriq4XP_031758114.1 PLN00113 76..>469 CDD:215061 103/419 (25%)
leucine-rich repeat 86..108 CDD:275380 2/21 (10%)
leucine-rich repeat 109..131 CDD:275380 4/26 (15%)
leucine-rich repeat 132..155 CDD:275380 7/22 (32%)
leucine-rich repeat 156..179 CDD:275380 4/24 (17%)
leucine-rich repeat 180..225 CDD:275380 12/49 (24%)
leucine-rich repeat 226..271 CDD:275380 13/48 (27%)
leucine-rich repeat 272..294 CDD:275380 9/29 (31%)
leucine-rich repeat 295..317 CDD:275380 7/22 (32%)
leucine-rich repeat 318..340 CDD:275380 5/22 (23%)
leucine-rich repeat 364..386 CDD:275380 6/24 (25%)
leucine-rich repeat 387..409 CDD:275380 7/22 (32%)
leucine-rich repeat 410..435 CDD:275380 6/25 (24%)
leucine-rich repeat 436..458 CDD:275380 5/21 (24%)
leucine-rich repeat 459..481 CDD:275380 4/21 (19%)
IQ 539..558 CDD:197470 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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