DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and podn

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_031756818.1 Gene:podn / 101730272 XenbaseID:XB-GENE-963382 Length:598 Species:Xenopus tropicalis


Alignment Length:570 Identity:150/570 - (26%)
Similarity:232/570 - (40%) Gaps:132/570 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CMG-----FP------ILHGADLCQPIGWRNFQCSEV-----ASLQDLVDLGAENWHTLAIRNVQ 65
            |.|     ||      |:|       :..:|.|..|:     ..|..|..|..:| :.|..|.:.
 Frog    74 CAGVDLREFPSNLPDIIIH-------LSLQNNQIEEIPPEDLTRLYKLETLNLQN-NRLTSRGIP 130

  Fly    66 TELEVGSGENADHLANLLDLDLTGAAPINVHTNGFSILPNLRQLNLSGCGLVDIRGNHFAPESAL 130
            .:|       .:||..|..|.|.        .|..|:.|                  .|.| |:|
 Frog   131 DDL-------FEHLEKLNYLYLA--------NNKLSLAP------------------RFLP-SSL 161

  Fly   131 QRIDFSHNQMELLDRDFFG---NLRKLIYANFSHNALKQCDLPHMPLLNR------LELGHNRLV 186
            ...||:.|.:..:....||   |||. :|.:  .|.|....:|. .:.||      |.|..|.|.
 Frog   162 ISADFAANNITKIYEMTFGHKPNLRS-VYLH--DNKLTDAGIPD-NMFNRSNRVETLILSSNFLK 222

  Fly   187 NATFGVCPQLQELILNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGL--ETFQPLAQLRKLNL 249
            .....:.|.|.:|.|.:|:|..:...||..|..|.||.|..||||:.|:  |||..|.:|..|:|
 Frog   223 YVPKNLPPALCKLHLQNNKLESIPSGAFSHLTDLRELYLLNNRLSNEGMDNETFTKLNKLEYLDL 287

  Fly   250 SQNALDALRPNVFGAVQNFV-LHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIAS--LSP 311
            |.|.|..: |:  |..:|.| |||::     |.||.:.||....:..|:.|.:..|.:.:  :.|
 Frog   288 SSNNLTKI-PS--GLPRNIVILHLEK-----NSIRFISDNVLTQIRNLEYLLLHNNKLRAHGIHP 344

  Fly   312 AHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLN 376
            ..||||..|..::: ||.:||..|.....  .:.||.|.:|.:..:.:..|....|  :..|||:
 Frog   345 GAFVGLKKLHTVHV-YNNLLEKVPPGLPR--RVKTLMLLHNQISSISKNDFATTYL--LEDLNLS 404

  Fly   377 GNRMK--HLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESL 439
            .|::.  ::|..||..|..|:.|:|..|.|||:.   :...:.|:.|.|..|.:..|..|.|..:
 Frog   405 YNKIMSGNVHKEAFRKLRLLKTLELSGNNLKSVP---YGLPKNLEILRLKDNDISSIPQDSLTGM 466

  Fly   440 SSVQEILVDNNRL---TFLAKVNVSFPNLKRVAIEGN-----PWQCPCFVKLQHWLATRDVVYLR 496
            ..::|..:.||:|   :|.:.......:|:.:.:.||     |...|         .|.:.:||:
 Frog   467 IKLKEFYLSNNKLKLSSFYSGAWAELSSLQILDLSGNQLSYIPSDLP---------ETLEYLYLQ 522

  Fly   497 DNTGYYKGERPLCIVTNVDYCIQNLQAVR----RLGIL-------GDFQG 535
            .|.          |:|..|...::...::    |..:|       |.|:|
 Frog   523 SNK----------IITVDDSAFESTPNIKGIFLRFNLLTAGSVKEGAFEG 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 51/163 (31%)
LRR_8 104..164 CDD:290566 15/62 (24%)
leucine-rich repeat 106..129 CDD:275380 2/22 (9%)
leucine-rich repeat 130..153 CDD:275380 8/25 (32%)
leucine-rich repeat 154..195 CDD:275380 10/46 (22%)
LRR_RI 194..455 CDD:238064 86/270 (32%)
LRR_8 194..254 CDD:290566 27/61 (44%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)
leucine-rich repeat 220..243 CDD:275380 13/24 (54%)
leucine-rich repeat 244..267 CDD:275380 8/22 (36%)
LRR_8 271..330 CDD:290566 18/60 (30%)
leucine-rich repeat 272..295 CDD:275380 6/22 (27%)
leucine-rich repeat 296..319 CDD:275380 8/24 (33%)
LRR_8 319..380 CDD:290566 16/60 (27%)
leucine-rich repeat 320..343 CDD:275380 6/22 (27%)
leucine-rich repeat 344..369 CDD:275380 6/24 (25%)
LRR_8 368..428 CDD:290566 19/61 (31%)
leucine-rich repeat 370..393 CDD:275380 8/24 (33%)
leucine-rich repeat 394..417 CDD:275380 7/22 (32%)
leucine-rich repeat 418..441 CDD:275380 7/22 (32%)
podnXP_031756818.1 LRRNT 59..87 CDD:396168 4/12 (33%)
leucine-rich repeat 90..113 CDD:275380 6/29 (21%)
PLN00113 105..>512 CDD:215061 128/461 (28%)
leucine-rich repeat 114..139 CDD:275380 8/32 (25%)
leucine-rich repeat 140..184 CDD:275380 15/70 (21%)
leucine-rich repeat 185..210 CDD:275380 8/28 (29%)
leucine-rich repeat 211..231 CDD:275380 4/19 (21%)
leucine-rich repeat 232..255 CDD:275380 8/22 (36%)
leucine-rich repeat 256..281 CDD:275380 13/24 (54%)
leucine-rich repeat 282..302 CDD:275380 8/22 (36%)
leucine-rich repeat 303..326 CDD:275380 9/27 (33%)
leucine-rich repeat 327..352 CDD:275380 8/24 (33%)
leucine-rich repeat 353..373 CDD:275380 6/22 (27%)
leucine-rich repeat 374..397 CDD:275380 5/22 (23%)
leucine-rich repeat 398..423 CDD:275380 8/24 (33%)
leucine-rich repeat 424..445 CDD:275380 7/23 (30%)
leucine-rich repeat 446..468 CDD:275380 6/21 (29%)
leucine-rich repeat 469..494 CDD:275380 5/24 (21%)
leucine-rich repeat 495..515 CDD:275380 5/28 (18%)
LRR_8 515..575 CDD:404697 12/58 (21%)
leucine-rich repeat 516..539 CDD:275380 6/32 (19%)
leucine-rich repeat 540..565 CDD:275380 5/23 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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