DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lrrd1

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_002934640.2 Gene:lrrd1 / 100490254 XenbaseID:XB-GENE-985410 Length:757 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
lrrd1XP_002934640.2 PLN00113 41..>611 CDD:215061
leucine-rich repeat 42..63 CDD:275380
leucine-rich repeat 64..86 CDD:275380
leucine-rich repeat 87..109 CDD:275380
leucine-rich repeat 110..132 CDD:275380
leucine-rich repeat 133..155 CDD:275380
leucine-rich repeat 156..178 CDD:275380
leucine-rich repeat 179..201 CDD:275380
leucine-rich repeat 202..224 CDD:275380
leucine-rich repeat 225..247 CDD:275380
leucine-rich repeat 248..270 CDD:275380
leucine-rich repeat 271..316 CDD:275380
leucine-rich repeat 340..385 CDD:275380
leucine-rich repeat 386..408 CDD:275380
leucine-rich repeat 409..431 CDD:275380
leucine-rich repeat 478..500 CDD:275380
leucine-rich repeat 501..520 CDD:275380
leucine-rich repeat 550..572 CDD:275380
leucine-rich repeat 573..595 CDD:275380
leucine-rich repeat 596..618 CDD:275380
Death 664..744 CDD:260017
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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