DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lrrc32.1

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_004912272.1 Gene:lrrc32.1 / 100489763 XenbaseID:XB-GENE-994459 Length:666 Species:Xenopus tropicalis


Alignment Length:592 Identity:145/592 - (24%)
Similarity:223/592 - (37%) Gaps:162/592 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 PNLRQLNLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRKLIYANFSHNAL---- 164
            |.::.|:||...|.:|..:|....|.|:.:|.|.||:..:....|..:.||...|.|.|.|    
 Frog    50 PGIQTLDLSHNDLENITEDHLMKYSFLESLDLSSNQLSFIQPHSFRKMHKLKEINLSGNDLDSFV 114

  Fly   165 --KQCDLPHMPLLNRLELGHNRLVNATFGV----CPQLQELILNDNQLIQLDVNAFRGLHGLLEL 223
              :...:..:|.:..|:|..|.|.|...|.    .|:||.|.|::|.:..:..:.|:|...|.|:
 Frog   115 HHRVSGIGVLPYVQTLDLSRNSLYNDMIGYFLQEAPRLQYLSLHENSITTISSDLFQGSPLLAEV 179

  Fly   224 QLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLH----------------- 271
            .|..|.:..|...:|:.|..|..::||.|::..:  :.|...|..||:                 
 Frog   180 DLHNNIIMDIEEGSFEYLKHLSMIDLSMNSITCI--SDFNLRQLKVLNLSKNSIKTFHTPDSEDE 242

  Fly   272 --LQQLDLSGNRI----------------------------------------RLLFDNQ----- 289
              |:::|||.|::                                        :|.|:.|     
 Frog   243 YLLEKVDLSHNKLSSFPQLPRVNNVIFIDLSKNYIHLGTETPGEDPDWMNYSFQLEFEEQNPKNI 307

  Fly   290 -FRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNN 353
             ...|.:|..||:|.|||.|:....|:.:.||..|.|..|.|..:....|:.|.:|.|||||.|:
 Frog   308 STVPLPKLNHLDLSYNSIKSIPDDFFLTMPSLTFLNLSKNCIQVLSLGHFSGLSSLATLDLSANS 372

  Fly   354 LEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRR- 417
            ::.|.   .|.|:||.::||.|..|:::.|.|..|..|..:..|.|..|.:......:....|| 
 Frog   373 IQNLS---LGANSLPSLQRLYLQHNQLRLLEPRIFQRLESIVLLHLQGNHVGPCMAGLGKAKRRT 434

  Fly   418 ---------------LQKLHLGHNLLEEI--------NLDVLESLSSVQEILVDNNRLTFLAK-- 457
                           ||.|:|..|:::.|        :|.||: ||....|.|..|.|..|.|  
 Frog   435 HAEEYRCVEFFNIPTLQHLNLRENMIQRIPASAFWGTSLKVLD-LSMNLGIKVKPNALFGLEKTL 498

  Fly   458 ------------VNVSFP---NLKRVAIEGN------PWQCPCFVKLQHWLATRDVVYLRDNTGY 501
                        :||..|   :||.:.:.||      .|...|      .|.|.| :.|...||.
 Frog   499 EVLFMEGNGLPSLNVDLPLFTHLKYLNLSGNQLSELPEWNSDC------RLETLD-LSLNSFTGL 556

  Fly   502 YKGERP--------LCIVTNVDYCIQNL---QAVRRLGIL----------------GDFQGEQVE 539
            .....|        |.:..|...|..|.   ..:||..:.                |:...||::
 Frog   557 EVSNIPVLENTLKTLSLYGNPLSCCANTWISHMIRRTAVTIVALNATTCNISKLYEGEMLVEQMD 621

  Fly   540 ADAFDDD 546
            .|..:.|
 Frog   622 PDICEKD 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 46/161 (29%)
LRR_8 104..164 CDD:290566 19/59 (32%)
leucine-rich repeat 106..129 CDD:275380 6/22 (27%)
leucine-rich repeat 130..153 CDD:275380 6/22 (27%)
leucine-rich repeat 154..195 CDD:275380 12/50 (24%)
LRR_RI 194..455 CDD:238064 89/349 (26%)
LRR_8 194..254 CDD:290566 19/59 (32%)
leucine-rich repeat 196..219 CDD:275380 7/22 (32%)
leucine-rich repeat 220..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..267 CDD:275380 5/22 (23%)
LRR_8 271..330 CDD:290566 23/123 (19%)
leucine-rich repeat 272..295 CDD:275380 9/68 (13%)
leucine-rich repeat 296..319 CDD:275380 9/22 (41%)
LRR_8 319..380 CDD:290566 24/60 (40%)
leucine-rich repeat 320..343 CDD:275380 7/22 (32%)
leucine-rich repeat 344..369 CDD:275380 11/24 (46%)
LRR_8 368..428 CDD:290566 19/75 (25%)
leucine-rich repeat 370..393 CDD:275380 8/22 (36%)
leucine-rich repeat 394..417 CDD:275380 3/22 (14%)
leucine-rich repeat 418..441 CDD:275380 10/30 (33%)
lrrc32.1XP_004912272.1 LRR_8 50..110 CDD:404697 19/59 (32%)
leucine-rich repeat 52..75 CDD:275380 6/22 (27%)
leucine-rich repeat 76..99 CDD:275380 6/22 (27%)
PLN00113 99..>579 CDD:215061 122/492 (25%)
leucine-rich repeat 100..151 CDD:275380 12/50 (24%)
leucine-rich repeat 152..175 CDD:275380 7/22 (32%)
leucine-rich repeat 176..199 CDD:275380 7/22 (32%)
leucine-rich repeat 200..220 CDD:275380 5/21 (24%)
leucine-rich repeat 245..314 CDD:275380 9/68 (13%)
leucine-rich repeat 315..338 CDD:275380 9/22 (41%)
leucine-rich repeat 339..362 CDD:275380 7/22 (32%)
leucine-rich repeat 363..385 CDD:275380 11/24 (46%)
leucine-rich repeat 386..409 CDD:275380 8/22 (36%)
leucine-rich repeat 410..449 CDD:275380 5/38 (13%)
leucine-rich repeat 450..472 CDD:275380 6/21 (29%)
leucine-rich repeat 473..520 CDD:275380 14/47 (30%)
leucine-rich repeat 498..512 CDD:275378 0/13 (0%)
leucine-rich repeat 521..542 CDD:275380 6/26 (23%)
leucine-rich repeat 543..566 CDD:275380 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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