DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and tlr13

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_002935047.2 Gene:tlr13 / 100485164 XenbaseID:XB-GENE-5873547 Length:948 Species:Xenopus tropicalis


Alignment Length:710 Identity:152/710 - (21%)
Similarity:251/710 - (35%) Gaps:233/710 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CMGFPILHGADLCQPIGWR---------------NFQCSEVASLQDLV-----DLGAENW--HTL 59
            |:|..::..||..|.:.::               .:..|.:..||:||     ..|.:.|  |.|
 Frog    43 CVGQSVVTLADAIQDLPYQTRVLNISENEISKIDGYTFSHLPKLQELVLRKNKVNGVDTWAFHNL 107

  Fly    60 -----------AIRNVQT-------ELEV-GSGENADHLANL-----------LDLDLTGAAPIN 94
                       .|:::.|       .|:: ....|..|...:           |||.....:...
 Frog   108 NDLLILDLSYNLIQSLDTVDLTDLKHLQIFDLSHNRIHTIQMGTLGPLGALQELDLSFNNVSDFR 172

  Fly    95 VHTNGFSILPNLRQLNLSGCGLVDIRGNHFAPE-SALQRIDFSHNQMELLDRDF----------- 147
            ...|..|.||:..:|:||...:.|::....... |:||.::..:|.:.:||..|           
 Frog   173 SVANAVSQLPDFLRLSLSSNFITDLKSEQSVTVLSSLQSLNLRNNSISVLDFTFYSMPSLIELNV 237

  Fly   148 ------------FGNLRKLIYANFSHNALKQCD-----LPHM----------------------- 172
                        |.||..|....|..|:|....     ||::                       
 Frog   238 TRNNLSAVNKSSFSNLPMLAKVTFDENSLNISQLLGLVLPNLTEFHWSSMRPALQHELVSACQVF 302

  Fly   173 ---PLLNRLELGHNRLV---NATFGVCPQLQELILNDNQLIQL---DVNAF-------------- 214
               |.|..|::.|:::.   .:..|.|..|..|||:.:.|.:|   |:..|              
 Frog   303 QTFPKLQLLDIKHSKIAVTNLSIIGRCTNLTSLILSTSPLPRLQEKDLQDFKYLEVLYLDKCKLR 367

  Fly   215 -------RGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHL 272
                   |||:.|..|.|..|:||.:..:.|.||..|:.|:||:|.|..|....|..::    .|
 Frog   368 RIANSSWRGLNNLHTLILERNQLSDLEDKLFSPLTSLQYLDLSKNYLTHLNEKAFSGLR----RL 428

  Fly   273 QQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPAT 337
            ..|.|.|.:|.....|.||..:.|::||:..|||:.:.....:.|..|..|.|..|.||.|:...
 Frog   429 NYLSLKGCKITAATRNNFRYFSNLRVLDLQDNSISLIKSNAHIYLRKLETLLLSGNKILTIQKNG 493

  Fly   338 FAALLNLDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLH----PLAFSSLPFLEYLK 398
            ...|::|..|.|:.||:..:.:..|  ..:..:|.|:|:.|::..||    |..|.:|..||||.
 Frog   494 LKGLVSLKELSLANNNIYKITDNTF--KFVKSLRSLDLSRNQLWPLHKFQSPTPFLNLTQLEYLD 556

  Fly   399 LGHN----------------------------------------ELKSLDV-------------- 409
            ..:.                                        .|..||:              
 Frog   557 ASYQAEGNIYIPASLFQGLQSLKVLRLQGNPSAFFRNVSFEFLLNLTELDISATVYTMTDPPISF 621

  Fly   410 --RMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFLAK-VNVSFPNLKRVAIE 471
              .:|..:.:|:.|.|.:|.::.:..||..::..::.|.:..||||.::: :..:.|||....:.
 Frog   622 EKELFKKLGQLRNLTLDNNGIQFLPEDVFTNVPMLEHISLRYNRLTNISEDILKNVPNLNYFDMY 686

  Fly   472 GNPWQCPC----FVKLQHW-------------------LATRDVVYLRD------NTGYY 502
            .|...|.|    |   |:|                   |...::::...      |||||
 Frog   687 MNTLSCSCDNYWF---QNWSKCNTEVQIPFIQSYKCFGLEANEMLFENQDFSFCTNTGYY 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 54/234 (23%)
LRR_8 104..164 CDD:290566 18/83 (22%)
leucine-rich repeat 106..129 CDD:275380 4/23 (17%)
leucine-rich repeat 130..153 CDD:275380 9/45 (20%)
leucine-rich repeat 154..195 CDD:275380 12/74 (16%)
LRR_RI 194..455 CDD:238064 85/344 (25%)
LRR_8 194..254 CDD:290566 25/83 (30%)
leucine-rich repeat 196..219 CDD:275380 11/46 (24%)
leucine-rich repeat 220..243 CDD:275380 9/22 (41%)
leucine-rich repeat 244..267 CDD:275380 8/22 (36%)
LRR_8 271..330 CDD:290566 19/58 (33%)
leucine-rich repeat 272..295 CDD:275380 8/22 (36%)
leucine-rich repeat 296..319 CDD:275380 7/22 (32%)
LRR_8 319..380 CDD:290566 18/60 (30%)
leucine-rich repeat 320..343 CDD:275380 8/22 (36%)
leucine-rich repeat 344..369 CDD:275380 6/24 (25%)
LRR_8 368..428 CDD:290566 21/119 (18%)
leucine-rich repeat 370..393 CDD:275380 9/26 (35%)
leucine-rich repeat 394..417 CDD:275380 8/78 (10%)
leucine-rich repeat 418..441 CDD:275380 6/22 (27%)
tlr13XP_002935047.2 LRR_RI <29..220 CDD:238064 34/176 (19%)
leucine-rich repeat 62..85 CDD:275380 1/22 (5%)
LRR_8 63..144 CDD:290566 13/80 (16%)
leucine-rich repeat 86..133 CDD:275380 10/46 (22%)
LRR_8 132..192 CDD:290566 13/59 (22%)
leucine-rich repeat 134..157 CDD:275380 3/22 (14%)
leucine-rich repeat 158..208 CDD:275380 11/49 (22%)
LRR_8 186..242 CDD:290566 11/55 (20%)
leucine-rich repeat 209..231 CDD:275380 6/21 (29%)
leucine-rich repeat 232..307 CDD:275380 9/74 (12%)
LRR_RI 253..534 CDD:238064 74/286 (26%)
leucine-rich repeat 308..331 CDD:275380 5/22 (23%)
leucine-rich repeat 332..355 CDD:275380 8/22 (36%)
leucine-rich repeat 356..379 CDD:275380 3/22 (14%)
LRR_8 379..438 CDD:290566 21/62 (34%)
leucine-rich repeat 380..403 CDD:275380 9/22 (41%)
leucine-rich repeat 404..427 CDD:275380 8/26 (31%)
leucine-rich repeat 428..451 CDD:275380 8/22 (36%)
leucine-rich repeat 452..475 CDD:275380 7/22 (32%)
LRR_8 474..534 CDD:290566 18/61 (30%)
leucine-rich repeat 476..499 CDD:275380 8/22 (36%)
LRR_8 499..587 CDD:290566 19/89 (21%)
leucine-rich repeat 500..523 CDD:275380 6/24 (25%)
leucine-rich repeat 524..577 CDD:275380 13/52 (25%)
leucine-rich repeat 578..631 CDD:275380 4/52 (8%)
LRR_8 631..685 CDD:290566 14/53 (26%)
leucine-rich repeat 632..655 CDD:275380 6/22 (27%)
leucine-rich repeat 656..676 CDD:275380 5/19 (26%)
TIR 792..935 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.