DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and slitrk3

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_002933279.1 Gene:slitrk3 / 100127669 XenbaseID:XB-GENE-964617 Length:885 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
slitrk3XP_002933279.1 LRR_8 81..137 CDD:338972
leucine-rich repeat 81..102 CDD:275380
leucine-rich repeat 103..126 CDD:275380
LRR_8 127..185 CDD:338972
leucine-rich repeat 127..150 CDD:275380
leucine-rich repeat 151..174 CDD:275380
leucine-rich repeat 175..197 CDD:275380
leucine-rich repeat 198..283 CDD:275380
leucine-rich repeat 224..236 CDD:275378
LRRCT 232..>270 CDD:214507
LRR <388..>562 CDD:227223
leucine-rich repeat 389..409 CDD:275380
leucine-rich repeat 410..433 CDD:275380
leucine-rich repeat 434..457 CDD:275380
LRR_8 457..516 CDD:338972
leucine-rich repeat 458..481 CDD:275380
leucine-rich repeat 482..505 CDD:275380
leucine-rich repeat 506..528 CDD:275380
leucine-rich repeat 529..553 CDD:275380
LRRCT 562..>597 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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