DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynB and atp5pb

DIOPT Version :9

Sequence 1:NP_524011.1 Gene:ATPsynB / 39143 FlyBaseID:FBgn0019644 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_989118.1 Gene:atp5pb / 394723 XenbaseID:XB-GENE-972907 Length:250 Species:Xenopus tropicalis


Alignment Length:248 Identity:115/248 - (46%)
Similarity:159/248 - (64%) Gaps:16/248 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSRAALLTAQ-----RPLTVAATRSAAA------AAAPGGAIERRQRPEHPGKVRLGFLPEEWF 54
            |.|||||.:|.     .||:|.......:      |.||...:     ||..||||.|.:|||:|
 Frog     1 MLSRAALTSASALRKTAPLSVGLLNQCRSFHKGQPAMAPVPPL-----PEKGGKVRFGLIPEEFF 60

  Fly    55 QFFYNKTGVTGPYTFGVGLITYLCSKEIYVMEHEYYSGLSLGIMAIIAVKKLGPVIAKWADGEID 119
            ||.|.||||||||..|.||:.||.||||||:.||.::..|:||:.:..:||.||.:|.:||...:
 Frog    61 QFLYPKTGVTGPYMLGTGLLVYLLSKEIYVINHETFAAASIGIVIVYGIKKFGPSVAAFADKLNE 125

  Fly   120 KIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVK 184
            :..::.:..:::.||.|..|||.|.|||||.:|...|.:||:.|:.:.||..:|||.:|||:|||
 Frog   126 EKVAKAQAVKDSALKNLERAIEEENKEQWRVEGRHHLFDAKRNNVTMLLEINYRERILNVYNEVK 190

  Fly   185 RRLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALA 237
            :||||||..:|::||..|.||:||:..||:.||:|||:||::.|||.||..|:
 Frog   191 KRLDYQVALQHLQRRKEQDHMINWVEKNVIQSITPQQQKESIAKCITDLKVLS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynBNP_524011.1 Mt_ATP-synt_B 73..233 CDD:368426 75/159 (47%)
atp5pbNP_989118.1 Mt_ATP-synt_B 79..240 CDD:368426 76/160 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 165 1.000 Domainoid score I3884
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1275
Inparanoid 1 1.050 219 1.000 Inparanoid score I3471
OMA 1 1.010 - - QHG52501
OrthoDB 1 1.010 - - D1314411at2759
OrthoFinder 1 1.000 - - FOG0005510
OrthoInspector 1 1.000 - - oto105344
Panther 1 1.100 - - LDO PTHR12733
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3753
SonicParanoid 1 1.000 - - X4458
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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