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Protein Alignment vsg and tmem123
DIOPT Version :9
Sequence 1: | NP_001261646.1 |
Gene: | vsg / 39137 |
FlyBaseID: | FBgn0045823 |
Length: | 262 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001923119.1 |
Gene: | tmem123 / 561344 |
ZFINID: | ZDB-GENE-050419-69 |
Length: | 130 |
Species: | Danio rerio |
Alignment Length: | 102 |
Identity: | 25/102 - (24%) |
Similarity: | 45/102 - (44%) |
Gaps: | 13/102 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 84 TPASTTSSTTPASTTSSTTPATTTTTPGTTSTTTPSP---NSTTTTPPPHTSTTPAPKPVPCGHF 145
|.::.:..:|..|...|.|| |..:..|...:|||. :::...||.|.:.. |.|
Zfish 32 TASNMSHYSTHLSKAKSITP--TEASVNTLHISTPSKHLISASIGVPPGHLTAG--------GGF 86
Fly 146 DGSSFIGGIVLTLGLLAIGLVAYKFYKARNERNYHTL 182
|..||:||::|...::....|.|:.:.::....|..:
Zfish 87 DAGSFLGGMILAFIIILAVAVGYRLFCSKRAIRYRVI 123
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
vsg | NP_001261646.1 |
MGC-24 |
<145..182 |
CDD:283050 |
10/36 (28%) |
tmem123 | XP_001923119.1 |
MGC-24 |
<23..115 |
CDD:310122 |
24/92 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170581656 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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