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Protein Alignment vsg and cd164
DIOPT Version :9
| Sequence 1: | NP_001261646.1 |
Gene: | vsg / 39137 |
FlyBaseID: | FBgn0045823 |
Length: | 262 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001038256.1 |
Gene: | cd164 / 555639 |
ZFINID: | ZDB-GENE-030131-1598 |
Length: | 167 |
Species: | Danio rerio |
| Alignment Length: | 190 |
Identity: | 66/190 - (34%) |
| Similarity: | 84/190 - (44%) |
Gaps: | 47/190 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 LILCLFVGL----FSA----------NLCEEVTTPAPADTTTQESKNTTTPPDTTTTVTPPSTST 58
|:|.|...: ||| :.||.||.....:.| |....|.....:.
Zfish 10 LLLALLGSMTSQQFSADEVCSTFHGCDACENVTLCQWMNCT-----------DGFQCVNSSHENQ 63
Fly 59 TSTTTEKTTTTPPITTSTEKTTTSTTPASTTSSTTPASTTSSTTPATTTTT-PGTTSTTTPSPNS 122
|:.......|.||:.::....|| |:|::||.|:|...|.|.|.|.. ..|.||||.||
Zfish 64 TANCVSANCTEPPVASTVNPVTT-----SSTNATTNATTVIPTIPVTPTRNGTDTNSTTTASP-- 121
Fly 123 TTTTPPPHTSTTPAPKPVPCGHFDGSSFIGGIVLTLGLLAIGLVAYKFYKARNERNYHTL 182
||.|..||| ||.:||||||||.|||.|:....|||.|:: :||||||
Zfish 122 --TTAPSKTST-----------FDAASFIGGIVLVLGLQAVIFFLYKFCKSK-DRNYHTL 167
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| vsg | NP_001261646.1 |
MGC-24 |
<145..182 |
CDD:283050 |
22/36 (61%) |
| cd164 | NP_001038256.1 |
MGC-24 |
29..167 |
CDD:283050 |
58/169 (34%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C170581658 |
| Domainoid |
1 |
1.000 |
73 |
1.000 |
Domainoid score |
I9222 |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_2CF8S |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0009084 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
oto40487 |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR11337 |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R5635 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.960 |
|
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