DRSC/TRiP Functional Genomics Resources

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Protein Alignment vsg and cd164l2

DIOPT Version :9

Sequence 1:NP_001261646.1 Gene:vsg / 39137 FlyBaseID:FBgn0045823 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_005159829.1 Gene:cd164l2 / 101883372 ZFINID:ZDB-GENE-120215-174 Length:150 Species:Danio rerio


Alignment Length:72 Identity:25/72 - (34%)
Similarity:32/72 - (44%) Gaps:19/72 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GTTSTTTPSPNSTTTTPPPHTSTTPAPKPVPCGHFDGSSFIGGIVLTLGLLAIGLVAYKFYKARN 175
            |.|..|||.|..:..:                  ||.|||||||:|.|.|.|.|..|.:|.|.: 
Zfish    94 GGTDNTTPGPQFSQAS------------------FDLSSFIGGIILVLVLQAGGFFAMRFLKTK- 139

  Fly   176 ERNYHTL 182
            :..|.|:
Zfish   140 DSTYETI 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vsgNP_001261646.1 MGC-24 <145..182 CDD:283050 18/36 (50%)
cd164l2XP_005159829.1 MGC-24 31..146 CDD:310122 24/70 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581657
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CF8S
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11337
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9493
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.930

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