DRSC/TRiP Functional Genomics Resources

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Protein Alignment SH3PX1 and SNX4

DIOPT Version :9

Sequence 1:NP_648348.1 Gene:SH3PX1 / 39136 FlyBaseID:FBgn0040475 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_012498.1 Gene:SNX4 / 853416 SGDID:S000003573 Length:423 Species:Saccharomyces cerevisiae


Alignment Length:428 Identity:90/428 - (21%)
Similarity:174/428 - (40%) Gaps:112/428 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 PY--SVVVASPKKESKFKGMKT-FIAYQLTPSFNNIS-------------VSRRYKHFDWLHERL 266
            ||  .::|:.|:|.:...|..: :::||::...||.|             |.|||.....||:.|
Yeast    25 PYWFEIIVSDPQKRTGDPGSSSGYVSYQISTKTNNTSFYDNRGDPESIIVVHRRYSDLLLLHDIL 89

  Fly   267 VDKFCLIPVPPLPDKQI-----SGRYEEQFVEHRRVQLQEFVDWVCRHPVISKCEVWYHFLTCRD 326
            :::|....:||||||::     ..|:.::|.:.|...||.|:..|..||.:|:.:|:..||..:|
Yeast    90 LNRFPTCIIPPLPDKKVFQYIAGDRFSQRFTQKRCHSLQNFLRRVSLHPDLSQSKVFKTFLVSKD 154

  Fly   327 EKIWKSGKRKAERDPYMGVNYCLAISPPDKN-----------LLHSKVDAQVELGTQFIHSMDVA 380
               |:| .||..:|...          |:|:           .:|.:.:...|: .:....:|..
Yeast   155 ---WES-HRKVLQDSLQ----------PNKDEVTDAFMNAFKTVHKQNEEFTEI-REKSDKLDRT 204

  Fly   381 VRNLNNISNDMAKRSMSQSKKEFQRIGDGLSDLAKALAIDERRAPTRNAVPLSESVGRIGGIFIG 445
            |..::.:.:.:.|::.|.| :::.::|..|.:|.:.:..:......:..: .:|.|.::      
Yeast   205 VTKIDKLFHKVVKKNDSMS-EDYTKLGSNLQELQELVTGENEELAAKLKI-FNEGVTQL------ 261

  Fly   446 IGQAFG---------------------------------DQPKHDWIPLSDRLHIYR-------- 469
               ::|                                 ||.:.|:..|||  ::.|        
Yeast   262 ---SYGLQDLTKYLDYEYIVDLKDLEHYIDSMRQLIKLKDQKQIDYEELSD--YLTRSIKEKNNL 321

  Fly   470 ----GVLNCFPDIFSTHKGAIQ---KRKDCEKLAGEGRMNNPQLHDVNRRTDVVSYTVLAELTHF 527
                |..|.|.:......|..|   :|:...||.|:......:|.:..:..|......|.|:.||
Yeast   322 ISGYGGSNFFANKLEELAGINQEASRREKINKLEGKITSLTGELENAKKVADGFEQECLKEIDHF 386

  Fly   528 KSERDTHLKHTLKNFIAEQIKFYQGVVARLQEASRQIE 565
            :|.:...:|.:|.:.....|:||:    |:.||..:::
Yeast   387 ESVKTAEIKKSLGSLADHHIEFYE----RILEAWEKVD 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH3PX1NP_648348.1 SH3_SNX9_like 4..59 CDD:212697
PX_SNX9_18_like 219..343 CDD:132772 43/144 (30%)
BAR_SNX9_like 362..564 CDD:153310 43/249 (17%)
SNX4NP_012498.1 COG5391 1..423 CDD:227680 90/428 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1659
SonicParanoid 1 1.000 - - X731
TreeFam 00.000 Not matched by this tool.
32.940

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