DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SH3PX1 and Snx9

DIOPT Version :9

Sequence 1:NP_648348.1 Gene:SH3PX1 / 39136 FlyBaseID:FBgn0040475 Length:565 Species:Drosophila melanogaster
Sequence 2:XP_038946688.1 Gene:Snx9 / 683687 RGDID:1584466 Length:659 Species:Rattus norvegicus


Alignment Length:640 Identity:205/640 - (32%)
Similarity:310/640 - (48%) Gaps:111/640 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RAMYDFTGEPGSSELSIATGDVLSVTRSDVGEGWWEGKNARGQIGLFPAAYVEV----------- 59
            |.||||..|||::||::..|:::::|..:||.||.||||::|:.||.|..|||:           
  Rat    39 RVMYDFAAEPGNNELTVNEGEIITITNPNVGGGWLEGKNSKGEQGLVPTDYVEILPNDGKDPFSC 103

  Fly    60 ------------MSAAEAQKLSASG--------------ATSVPQVP------------------ 80
                        :||:.||..|:|.              ..|:.|.|                  
  Rat   104 GNSVADQAFLDSLSASTAQANSSSANSNNQVDIWAQVGCVESLSQSPPSSSSSSPSSSINKVGGG 168

  Fly    81 -DPFASPPLPRYDQTADDDGSNWDDEDDWSDDNDTYSEIGPGGQKSAGQSARAGGLSH------- 137
             ||:::...||        ..|||..|.|....|     |.|.|:::..:....|..|       
  Rat   169 SDPWSAWNAPR--------SGNWDSSDAWGTRTD-----GAGAQRNSSANNWDTGFGHPQAYQGP 220

  Fly   138 STSDYD---------NKHLPIAPNDDTQSLASVAGGTGAAGTVKKGM-------FAK-SSDSYIL 185
            :|.|.|         ....|...:.:......:..|...||.....:       ||| ..:.|:|
  Rat   221 ATGDDDEWDEDWDDPKSSSPYFKDSEPAEAGGIQRGNSRAGASSMKLPLNKFPGFAKPGMEQYLL 285

  Fly   186 G--LSSTKEKIPECEMAYITQVEDSIYQWTQNHSPYSVVVASPKKESKFKGMKTFIAYQLTPSFN 248
            .  |:..|||||       ..|.|....|....|.:..|||.|:|.||..|:|::|.|||||:..
  Rat   286 AKQLAKPKEKIP-------IIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNT 343

  Fly   249 NISVSRRYKHFDWLHERLVDKF-CLIPVPPLPDKQISGRYEEQFVEHRRVQLQEFVDWVCRHPVI 312
            |.||:.||||||||:|||:.|| ..||:|.|||||::||:||:|::.|..:||.::..:|||||:
  Rat   344 NRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVV 408

  Fly   313 SKCEVWYHFLTCRDEKIWKSGKRKAERDPYMGVNYCLAISP--PDKNLLHSKVDAQVELGTQFIH 375
            |:.||:..||..||||.||:||||||:|..:||.....:.|  ||.:|:  :::.:.:...:|..
  Rat   409 SESEVFQQFLNFRDEKEWKTGKRKAEKDELVGVMIFSTMEPEAPDLDLI--EIEQKCDAVGKFTK 471

  Fly   376 SMDVAVRNLNNISNDMAKRSMSQSKKEFQRIGDGLSDLAKALAIDERRAPTRNAVPLSESVGRIG 440
            :||..|:.|..:..:..||......||:|:||..|..||...:....:..|    .|:.::...|
  Rat   472 AMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLAAVFSSSGYQGET----DLNNAITEAG 532

  Fly   441 GIFIGIGQAFGDQPKHDWIPLSDRLHIYRGVLNCFPDIFSTHKGAIQKRKDCEKLAGEGRMNNPQ 505
            ..:..|.....:|||.|...|.:..|.|:|.|.|||||...|||||:|.|:.:||....::....
  Rat   533 KTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGAHKGAIEKVKESDKLVATSKITPQD 597

  Fly   506 LHDVNRRTDVVSYTVLAELTHFKSERDTHLKHTLKNFIAEQIKFYQGVVARLQEA 560
            ...:.:|...:||.:.||:.||.|.|.......::.::.:|::||:.:..:|::|
  Rat   598 KQTMVKRVGTMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQA 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH3PX1NP_648348.1 SH3_SNX9_like 4..59 CDD:212697 26/52 (50%)
PX_SNX9_18_like 219..343 CDD:132772 70/124 (56%)
BAR_SNX9_like 362..564 CDD:153310 56/199 (28%)
Snx9XP_038946688.1 SH3_SNX9 37..93 CDD:212831 27/53 (51%)
COG5391 200..>421 CDD:227680 81/227 (36%)
PX_SNX9 314..439 CDD:132818 70/124 (56%)
BAR_SNX9 450..659 CDD:153352 59/209 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4247
eggNOG 1 0.900 - - E1_KOG2528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 326 1.000 Inparanoid score I2394
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351108at33208
OrthoFinder 1 1.000 - - FOG0006163
OrthoInspector 1 1.000 - - otm45135
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45827
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X731
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.970

Return to query results.
Submit another query.