DRSC/TRiP Functional Genomics Resources

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Protein Alignment SH3PX1 and SNX1

DIOPT Version :9

Sequence 1:NP_648348.1 Gene:SH3PX1 / 39136 FlyBaseID:FBgn0040475 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_001229862.1 Gene:SNX1 / 6642 HGNCID:11172 Length:557 Species:Homo sapiens


Alignment Length:562 Identity:107/562 - (19%)
Similarity:208/562 - (37%) Gaps:126/562 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GATSVPQVPDPFASPPLPRYDQTADDDGSNWDDEDDWSDDNDTYSEIGPGGQKSAGQSARAGGL- 135
            |.::..::|.||  |.|     ..:.:|:....|.: :.|:||           .|:....|.. 
Human     7 GCSASERLPPPF--PGL-----EPESEGAAGGSEPE-AGDSDT-----------EGEDIFTGAAV 52

  Fly   136 --SHSTSDYDNKHLPI-----------APNDDTQSL---ASVAGGTGAAGTVKKGMFAKSSDSYI 184
              .|.:.......|||           ..:.:.|.|   |:|.....:....:|.:.||:    :
Human    53 VSKHQSPKITTSLLPINNGSKENGIHEEQDQEPQDLFADATVELSLDSTQNNQKKVLAKT----L 113

  Fly   185 LGL---SSTKEKIPECEMAYITQVEDSIYQWTQNHSPYSVVVASPKKESKFKGMKTFIAYQLT-- 244
            :.|   .:|....|:.....:.:.|.      ::....:|.:..|:|..  .||..::||::|  
Human   114 ISLPPQEATNSSKPQPTYEELEEEEQ------EDQFDLTVGITDPEKIG--DGMNAYVAYKVTTQ 170

  Fly   245 ---PSFNN--ISVSRRYKHFDWLHERLVDKFCL--IPVPPLPDKQISGRYE----------EQFV 292
               |.|.:  .:|.||:..|..|:|:|.:|...  ..|||.|:|.:.|..:          .:|:
Human   171 TSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFL 235

  Fly   293 EHRRVQLQEFVDWVCRHPVISKCEVWYHFLTCRD-------EKIWKSGKRKAERDPYMGVNYCLA 350
            |.||..|:.::..:..||.:.:......||...:       :.:..:|..|........|:. :.
Human   236 EKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSK-MT 299

  Fly   351 ISPPDKNLLHSKVDAQVELGTQFIHSMDVAVRNLNNISNDMAKRSMSQSKKEFQRIGDGLSDLAK 415
            |...:.::...:...:||...|.:..:...|..|.|...::|..:               :..||
Human   300 IKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNT---------------AQFAK 349

  Fly   416 ALAIDERRAPTRNAVPLSESVGRIGGIFIGIGQAFGDQPKHDWIPLSDRLHIYRGVLNCFPDIFS 480
            :||:   ...:.:...||.::.::..:...|.|...:|..:|:..|::.|..|..:|......|.
Human   350 SLAM---LGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFD 411

  Fly   481 THKGAIQKRKDCE-----KLAGEGRM---NNP---------------QLHDVNRRTDVVSYTVLA 522
            ......|:.:|.:     |...|.|:   |.|               ::....|..:.:|..|..
Human   412 QRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRK 476

  Fly   523 ELTHFKSERDTHLKHTLKNFIAEQIKFYQGVVARLQEASRQI 564
            |:..|:.|:.       |:|....||:.:.::...|:|..|:
Human   477 EVIRFEKEKS-------KDFKNHVIKYLETLLYSQQQAGEQL 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH3PX1NP_648348.1 SH3_SNX9_like 4..59 CDD:212697
PX_SNX9_18_like 219..343 CDD:132772 35/149 (23%)
BAR_SNX9_like 362..564 CDD:153310 41/224 (18%)
SNX1NP_001229862.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..84 17/95 (18%)
Sorting_nexin 55..130 CDD:281663 14/78 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..142 4/32 (13%)
PX_SNX1 145..268 CDD:132814 33/124 (27%)
Membrane-binding amphipathic helix. /evidence=ECO:0000303|PubMed:19816406 281..298 3/17 (18%)
BAR 286..506 CDD:299863 42/245 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1659
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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