DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment SH3PX1 and snx11

DIOPT Version :9

Sequence 1:	NP_648348.1	Gene:	SH3PX1 / 39136	FlyBaseID:	FBgn0040475	Length:	565	Species:	Drosophila melanogaster
Sequence 2:	XP_021335737.1	Gene:	snx11 / 492678	ZFINID:	ZDB-GENE-041111-253	Length:	579	Species:	Danio rerio

Alignment Length:	158	Identity:	47/158 - (29%)
Similarity:	63/158 - (39%)	Gaps:	45/158 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   169 GTVKKGMFAKSSDSYILGLSSTKEKI--PEC-----EMAYITQVEDSIYQWTQNHSPYSVVVASP 226
            |.||...|.|        |..||:||  |.|     .|:...:.::.|          :|.|..|
Zfish    45 GIVKILAFFK--------LWKTKDKIICPLCCVSSGRMSKSQEQDEFI----------AVRVQDP 91

  Fly   227 KKESK--------FK-----GMKTFIAYQLTPSFNNISVSRRYKHFDWLHERLVDKFCLIPVPPL 278
            :.:::        ||     ..|.|.|       ....|.|||..|.||.::|.....|:|||.|
Zfish    92 RVQNEGSWNSYVDFKIFLHTNSKAFTA-------KTSCVRRRYSEFAWLKKKLQKNAGLVPVPEL 149

  Fly   279 PDKQISGRYEEQFVEHRRVQLQEFVDWV 306
            |.|.|.....:.|:|.||..||.|:|.|
Zfish   150 PKKSIFSFINDDFIERRRKGLQGFLDKV 177

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SH3PX1	NP_648348.1	SH3_SNX9_like	4..59	CDD:212697
		PX_SNX9_18_like	219..343	CDD:132772	33/101 (33%)
		BAR_SNX9_like	362..564	CDD:153310
snx11	XP_021335737.1	PX_SNX10	86..196	CDD:132808	33/99 (33%)
snx11	XP_021335737.1	DnaJ	<374..>502	CDD:333066
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910