DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SH3PX1 and snx9a

DIOPT Version :9

Sequence 1:NP_648348.1 Gene:SH3PX1 / 39136 FlyBaseID:FBgn0040475 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_001012313.2 Gene:snx9a / 368424 ZFINID:ZDB-GENE-030616-66 Length:562 Species:Danio rerio


Alignment Length:600 Identity:200/600 - (33%)
Similarity:304/600 - (50%) Gaps:79/600 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSYVRAMYDFTGEPGSSELSIATGDVLSVTRSDVGEGWWEGKNARGQIGLFPAAYVEVMSAAEA 65
            |....:.:||||.|||::||::..|:.|::|..:||.||.|.:|:||.:||.|..||||.||:  
Zfish     1 MAVKAQVLYDFTAEPGNNELTVHEGETLTITNQNVGGGWVEAQNSRGNVGLVPVDYVEVNSAS-- 63

  Fly    66 QKLSASGATSVPQVPDPFASPPLPRY---------DQTADDDGSNWDD---EDDWSD----DNDT 114
                              |..|..:|         :.||:..|.|.::   ...||:    ||..
Zfish    64 ------------------AQAPATQYIDARNQGNNNSTANTQGVNGNEAWTATTWSNSYPADNWN 110

  Fly   115 YSEIGPGGQKSAGQSARAGGLSHSTSDYDNKHLPIAPNDDTQSLASVAGGTGAAGTVKKGMFAKS 179
            |:|..|.|..        |.:.....::|:      .:||.:|    .||.|.:.....|...:|
Zfish   111 YTEQEPAGNN--------GSVYSFDEEWDD------DSDDGKS----TGGYGGSQAEDGGTMQRS 157

  Fly   180 SDSYILGLSSTK----EKIPECEM----AYITQVED--SIYQ------WTQNHSPYSVVVASPKK 228
            .....:.||..|    .|.|..|:    .:||:..|  |:|.      |....:....|||.|||
Zfish   158 GAHSTMKLSLNKFPGFSKTPNPEVYLLTKHITKGNDRLSVYPGEVGPVWLYPQTQLDCVVADPKK 222

  Fly   229 ESKFKGMKTFIAYQLTPSFNNISVSRRYKHFDWLHERLVDKF-CLIPVPPLPDKQISGRYEEQFV 292
            .||..|:|::|.||:||:..|..|:.||||||||:||||:|| |.:|||.|||||::||:||:|:
Zfish   223 GSKMYGLKSYIEYQITPNTTNRPVNHRYKHFDWLYERLVEKFACALPVPGLPDKQVTGRFEEEFI 287

  Fly   293 EHRRVQLQEFVDWVCRHPVISKCEVWYHFLTCRDEKIWKSGKRKAERDPYMGVNYCLAISPPDKN 357
            :.|..:||.::..:|||||||..||:..||..||||.||.||||||:|..:||.....|.|....
Zfish   288 KMRMERLQGWMSRMCRHPVISNSEVFQLFLNYRDEKEWKLGKRKAEKDETVGVKIFSTIDPELPE 352

  Fly   358 LLHSKVDAQVELGTQFIHSMDVAVRNLNNISNDMAKRSMSQSKKEFQRIGDGLSDLAKALAIDER 422
            |..::|:.:.|:..||..|||.:|:.|..:.|...||.....:||:::||....:::.  ..:..
Zfish   353 LDPAQVEQKYEVYNQFTRSMDNSVKELLAVGNLHWKRCTGPLQKEYRQIGKAFQNMSS--VFNTS 415

  Fly   423 RAPTRNAVPLSESVGRIGGIFIGIGQAFGDQPKHDWIPLSDRLHIYRGVLNCFPDIFSTHK---- 483
            ..|..:.  |:|::...|..:..|.:....||:.|...|.:..:.|:|:|.||||....||    
Zfish   416 GYPREST--LTEALTATGKTYEEIAEVIAAQPRKDLHFLLETNNEYKGLLGCFPDTIGVHKVTIC 478

  Fly   484 GAIQKRKDCEKLAGEGRMNNPQLHDVNRRTDVVSYTVLAELTHFKSERDTHLKHTLKNFIAEQIK 548
            .||.|.|:.:.|....:::....|.:.:....:||.:.||:.||.|.|.......::.::.||:|
Zfish   479 AAIDKVKEADHLVMTNKISQQDKHTMEKNLSTMSYALQAEMNHFHSNRIYDYNRLMQFYLEEQVK 543

  Fly   549 FYQGVVARLQEASRQ 563
            ||:.:..:|::|..|
Zfish   544 FYETIAEKLKKALGQ 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH3PX1NP_648348.1 SH3_SNX9_like 4..59 CDD:212697 25/54 (46%)
PX_SNX9_18_like 219..343 CDD:132772 72/124 (58%)
BAR_SNX9_like 362..564 CDD:153310 55/205 (27%)
snx9aNP_001012313.2 SH3 4..60 CDD:302595 26/55 (47%)
PX_SNX9 213..338 CDD:132818 72/124 (58%)
BAR_3_WASP_bdg 321..560 CDD:287434 72/241 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5351
eggNOG 1 0.900 - - E1_KOG2528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351108at33208
OrthoFinder 1 1.000 - - FOG0006163
OrthoInspector 1 1.000 - - otm24359
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X731
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.880

Return to query results.
Submit another query.