DRSC/TRiP Functional Genomics Resources

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Protein Alignment SH3PX1 and Snx6

DIOPT Version :10

Sequence 1:NP_648348.1 Gene:SH3PX1 / 39136 FlyBaseID:FBgn0040475 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_001102181.1 Gene:Snx6 / 362738 RGDID:1304647 Length:406 Species:Rattus norvegicus


Alignment Length:371 Identity:73/371 - (19%)
Similarity:137/371 - (36%) Gaps:88/371 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 PSF--NNISVSRRYKHFDWLHERLVDK-----FCLIPVPPLPDKQIS-------GRYE-----EQ 290
            |:|  |..||.|:::.|.|||:..|:.     :.:.|.||.||...|       |..|     |:
  Rat    57 PNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKEE 121

  Fly   291 FVEHRRVQLQEFVD-----------WVCR---HPVISKCEVWYHFLTCRDEKIWKSGKRKAERDP 341
            |.:.::....|::.           ::||   ||::.| ::.:|.....::.:...||.|.|:  
  Rat   122 FTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRK-DLNFHVFLEYNQDLSVRGKNKKEK-- 183

  Fly   342 YMGVNYCLAISPPDKNLLHSKVDAQVELGTQ-----FIHSMDVAVRNLNNISNDMAK-----RSM 396
                     :....||::.| .|..:..|.:     |.|.....:...|.:.:..||     ||.
  Rat   184 ---------LEDFFKNMVKS-ADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTRSH 238

  Fly   397 SQSKKEFQRIGDGLSDLAKALAIDERRAPTRNAVPLSESVGRIGGIFIGIGQAFGDQPK------ 455
            ..:..::.|||..|..|.           |:::..:.:       .|:.:.:.|....|      
  Rat   239 KSAADDYNRIGSSLYALG-----------TQDSTDICK-------FFLKVSELFDKTRKIEARVS 285

  Fly   456 -HDWIPLSDRLHIYRGVLNCFPDIFSTHKGAIQKRKDCEKLAGEGRMNNPQLHDVN-------RR 512
             .:.:.|||.|..|........|:......::...::..|...:.|..|..:....       ::
  Rat   286 ADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQK 350

  Fly   513 TDVVSYTVLAELTHFKSERDTHLKHTLKNFIAEQIKFYQGVVARLQ 558
            .:.:|.:...||..||:.|....:..|......::|..:|.:..||
  Rat   351 FEKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQ 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH3PX1NP_648348.1 SH3_SNX9_like 4..59 CDD:212697
PX_SNX9_18_like 219..343 CDD:132772 32/130 (25%)
BAR_SNX9_like 362..564 CDD:153310 38/221 (17%)
Snx6NP_001102181.1 PX_SNX6 30..170 CDD:132825 28/113 (25%)
BAR_SNX6 186..403 CDD:153346 41/230 (18%)
Blue background indicates that the domain is not in the aligned region.

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