DRSC/TRiP Functional Genomics Resources

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Protein Alignment SH3PX1 and snx1a

DIOPT Version :9

Sequence 1:NP_648348.1 Gene:SH3PX1 / 39136 FlyBaseID:FBgn0040475 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_001122143.2 Gene:snx1a / 337386 ZFINID:ZDB-GENE-060302-3 Length:659 Species:Danio rerio


Alignment Length:555 Identity:111/555 - (20%)
Similarity:203/555 - (36%) Gaps:132/555 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PQVPDPFAS-PPLPRY------DQTADDDGSNWDDEDDWSDDNDTYSE--IGPGGQKSAGQSARA 132
            |.:..|.|| |||..|      .|..|             |..|.::|  :.|...|.|. :.|.
Zfish   162 PVIKKPQASVPPLDVYTEVKVKPQVKD-------------DPTDLFTEEALTPPASKPAA-NTRT 212

  Fly   133 GGLSHSTSDYDNK---HLPI-APNDDTQSLASVAGGTGAAGTVKKGMFAKSSDSYILGLSSTKEK 193
            .|:.....|..::   .|.: :|::|.:...||.....|.........:|..       |.|.|:
Zfish   213 NGVHSEEQDLFSEATVELSLDSPHNDRKKKDSVNPSVSAPAAPVASSSSKPP-------SKTLEE 270

  Fly   194 IPECEMAYITQVEDSIYQWTQNHSPYSVVVASPKKESKFKGMKTFIAYQLTPSFN-------NIS 251
            :.|.|              :::....:|.:.:|:|..  .||..::.|:::...:       ..:
Zfish   271 LEEEE--------------SEDKFDLNVSITNPEKVG--DGMNAYMVYKVSTQTSLSMFRSKTFT 319

  Fly   252 VSRRYKHFDWLHERLVDKFCL--IPVPPLPDKQISGRYE----------EQFVEHRRVQLQEFVD 304
            |.||:..|..|:|:|.:|...  ..|||.|:|.|.|..:          .:|||.||..|:.::.
Zfish   320 VRRRFSDFLGLYEKLSEKHSQNGYIVPPPPEKSIMGMTKVKVGKEDPSSAEFVERRRAALERYLQ 384

  Fly   305 WVCRHPVISKCEVWYHFLTCRDEKIWKSGKRKAERDPYMGVNYCLAISPPDKNLLHSKVDA---- 365
            .|..||.:.:......||    ||  :...|........|..:.        .:|:...||    
Zfish   385 RVVSHPSLLQDPDVREFL----EK--EELPRAVSTQTLSGAGFL--------KMLNKATDAVSKM 435

  Fly   366 QVELGTQFIHSMDVAVRNLNNISNDMAK-----RSMSQSKKEFQRIGDGLSDLAKALAIDERRAP 425
            .:::..|.:. .|..::::.|....:.|     .|:...:||   :....:..||::|:   ...
Zfish   436 TIKMNEQDVW-FDEKIQDVENEEQLLRKLHVMVESLVNHRKE---LSGNTAAFAKSVAM---LGS 493

  Fly   426 TRNAVPLSESVGRIGGIFIGIGQAFGDQPKHDWIPLSDRLHIYRGVLNCFPDIFSTHKGAIQKRK 490
            :.:...||.::.::..:...|.|...||..:|:...::.|..|..:|......|.....|.|:.:
Zfish   494 SEDNTALSRALSQLAEVEDRIEQLHRDQAANDFFTFAELLADYIRLLGAVRGCFDQRMKAWQRWQ 558

  Fly   491 DCEKLAGEGR--------MNNP---------------QLHDVNRRTDVVSYTVLAELTHFKSERD 532
            |.|.:..:.|        .|.|               ::....|..:.:|.||..::..|..|:.
Zfish   559 DAESMLQKKREAEAKLLWANKPDKLQQAKDEIAEWEAKVTQYERDFERISATVQKDVIRFDKEKA 623

  Fly   533 THLKHTLKNFI-------AEQIKFYQGVVARLQEA 560
            ...|..:..::       .:.||:::   |.|.||
Zfish   624 RDFKRQIIKYLESLLHSQQQLIKYWE---AFLPEA 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH3PX1NP_648348.1 SH3_SNX9_like 4..59 CDD:212697
PX_SNX9_18_like 219..343 CDD:132772 35/142 (25%)
BAR_SNX9_like 362..564 CDD:153310 43/238 (18%)
snx1aNP_001122143.2 Sorting_nexin 180..256 CDD:281663 17/89 (19%)
PX_SNX1 282..405 CDD:132814 34/130 (26%)
BAR_SNX1 423..656 CDD:153349 44/243 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1659
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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