DRSC/TRiP Functional Genomics Resources

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Protein Alignment SH3PX1 and lst-4

DIOPT Version :10

Sequence 1:NP_648348.1 Gene:SH3PX1 / 39136 FlyBaseID:FBgn0040475 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_001379029.1 Gene:lst-4 / 178361 WormBaseID:WBGene00003086 Length:592 Species:Caenorhabditis elegans


Alignment Length:511 Identity:178/511 - (34%)
Similarity:275/511 - (53%) Gaps:48/511 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 AAEAQKLSASGATSVPQVPDPFA-------SPPLPRYDQTADDDGSNWDDEDDWSDDNDTYSEIG 119
            ||.::.....|..|....|..:.       :|.:|...::: ....|.|.:|:|:|::|......
 Worm   107 AASSRPFDDWGGASEVAAPPSYGAQHHHQPTPSVPEVTRSS-YPSQNDDFDDEWTDEDDEQEPTR 170

  Fly   120 PGGQKSAGQSARAGGLSHSTSDYDNKHLPIAPNDDTQSLASVAGGTGAAGTVKKGM-----FAKS 179
            |..|.|.|.::|. .||.|.|::                   .|....:..|.|.:     |.||
 Worm   171 PNVQSSIGSNSRR-DLSRSHSEH-------------------GGPDRGSNKVNKNINRFSNFVKS 215

  Fly   180 S-DSYILGLSSTKEKIPECEMAYITQVEDSIYQWTQNHSPYSVVVASPKKESKFKGMKTFIAYQL 243
            . ::|::|.|.|..:|.|   .:...:.:.|.||......|:.:|..||||||.||:|:||||.:
 Worm   216 GVEAYVIGESKTTSQISE---RHEVVMNNGIIQWKPIQQYYTCIVDKPKKESKLKGLKSFIAYSI 277

  Fly   244 TPSFNNI--SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQISGRYEEQFVEHRRVQLQEFVDWV 306
            |.|..||  .|||||||||||||:|..|:.|||:||||:||::|||||..::||:..||.:|:.:
 Worm   278 TSSLTNIQRQVSRRYKHFDWLHEQLSAKYVLIPIPPLPEKQVAGRYEEDLIDHRKHILQLWVNKI 342

  Fly   307 CRHPVISKCEVWYHFLTCRDEKIWKSGKRKAERDPYMGVNYCLAISPPDKNLLHSKVDAQVELGT 371
            |||||:|:.|||.||::|.|||.||:|||:||:|.|:|..:...|:.|.:.|..:.||.|||...
 Worm   343 CRHPVLSQSEVWLHFISCTDEKDWKNGKRRAEKDEYIGGAFLNCITVPHQPLDPNNVDMQVERFQ 407

  Fly   372 QFIHSMDVAVRNLNNISNDMAKRSMSQSKKEFQRIGDGLSDLAKALAIDERRAPTRNAVPLSESV 436
            :.:.:.:.|:|.:....|...|......|:.:|::|.....|.::..|||..|..|    |:|::
 Worm   408 RSVKTSEEAMRVMQERMNMFQKVFAGPVKQNWQKMGSAFKTLQQSFEIDETVASRR----LTEAL 468

  Fly   437 GRIGGIFIGIGQAFGDQPKHDWIPLSDRLHIYRGVLNCFPDIFSTHKGAIQKRKDCEKLAGEGRM 501
            ......:..|||.|....|:|..|:.:.|:.|:|.:...|||...||.|:||.:|     .|||:
 Worm   469 AYTASEYHEIGQVFDAHTKNDMEPVLENLYSYKGTVQNVPDIIQVHKQAVQKFRD-----SEGRL 528

  Fly   502 NNPQLHDVNRRTDVVSYTVLAELTHFKSERDTHLKHTLKNFIAEQIKFYQGVVARL 557
            ::.:...:.:|.|.:||||:||:.|..:|:...:|.|:..::.:|..|||.|..:|
 Worm   529 SSAEAEKMKQRIDAMSYTVIAEVQHQTAEKVEDMKSTMGTYLKKQAMFYQEVATKL 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH3PX1NP_648348.1 SH3_SNX9_like 4..59 CDD:212697
PX_SNX9_18_like 219..343 CDD:132772 76/125 (61%)
BAR_SNX9_like 362..564 CDD:153310 60/196 (31%)
lst-4NP_001379029.1 PX_SNX9_18_like 253..379 CDD:132772 76/125 (61%)
BAR 362..592 CDD:472257 76/232 (33%)
Blue background indicates that the domain is not in the aligned region.

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