DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and RAD6

DIOPT Version :10

Sequence 1:NP_524010.2 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_011457.1 Gene:RAD6 / 852822 SGDID:S000003026 Length:172 Species:Saccharomyces cerevisiae


Alignment Length:146 Identity:49/146 - (33%)
Similarity:75/146 - (51%) Gaps:4/146 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPET 65
            |:..|..|:.|:||   |.:|.....:....:.|:.......|.||.|||||.|.|.|.::..|.
Yeast     1 MSTPARRRLMRDFK---RMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEE 62

  Fly    66 YPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130
            ||..||.|:|::.::|||:.: .|.||||||::.|.....:.::|.|:|:|.....|..|.:...
Yeast    63 YPNKPPHVKFLSEMFHPNVYA-NGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEA 126

  Fly   131 AYQFKDKYDLFLLTAK 146
            |..|||....::...|
Yeast   127 ATLFKDHKSQYVKRVK 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_524010.2 UBCc_UBE2K 6..151 CDD:467420 47/141 (33%)
UBA_II_E2_UBCD4 163..198 CDD:270574
RAD6NP_011457.1 UBCc_UBE2A_2B 3..145 CDD:467410 48/144 (33%)
Blue background indicates that the domain is not in the aligned region.

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