DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and UBC1

DIOPT Version :10

Sequence 1:NP_524010.2 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_010462.3 Gene:UBC1 / 851757 SGDID:S000002584 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:193 Identity:86/193 - (44%)
Similarity:118/193 - (61%) Gaps:4/193 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VSRIKREFKEVMRSEEIVQCSIKIELVNDS-WTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFN 69
            :||.||..||:...::.....|.:|.|::| ...|:|...|||.|||||||||::|:||..|||.
Yeast     1 MSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFK 65

  Fly    70 PPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQF 134
            |||::|.|:::|||||||||||||||||:.|:..:||::.|:||||||.:.||:|||||.||..:
Yeast    66 PPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHY 130

  Fly   135 KDKYDLFLLTAKHWTNAYAGGPHTFPDCDSKIQRLRDMGIDEHEARAVLSKENWNLEKATEGL 197
            ....:.|..||..||..||.  .|.......::.....||| |:.......:.:..:|..|.|
Yeast   131 LRDRESFNKTAALWTRLYAS--ETSNGQKGNVEESDLYGID-HDLIDEFESQGFEKDKIVEVL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_524010.2 UBCc_UBE2K 6..151 CDD:467420 76/145 (52%)
UBA_II_E2_UBCD4 163..198 CDD:270574 7/35 (20%)
UBC1NP_010462.3 UBCc_UBE2K 4..147 CDD:467420 74/142 (52%)
UBA_3 161..215 CDD:117832 7/31 (23%)

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