DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and UBE2I

DIOPT Version :9

Sequence 1:NP_001287013.1 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:XP_005255597.1 Gene:UBE2I / 7329 HGNCID:12485 Length:184 Species:Homo sapiens


Alignment Length:149 Identity:44/149 - (29%)
Similarity:77/149 - (51%) Gaps:12/149 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGE--IAGPPDTPYEGGKFVLEIKVP 63
            |:.:|:||:.:|.|...:.......::..:..:.:...:..|  |.|...||:|||.|.|.:...
Human     1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFK 65

  Fly    64 ETYPFNPPKVRFITRIWHPNISSVTGAICLDILKD--NWAAAMTLRTVLLSLQALLAAAEPDDPQ 126
            :.||.:|||.:|...::|||:.. :|.:||.||::  :|..|:|::.:||.:|.||......||.
Human    66 DDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPA 129

  Fly   127 DAVVAYQFKDKYDLFLLTA 145
            .|       :.|.::.|.|
Human   130 QA-------EAYTIYWLVA 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_001287013.1 COG5078 1..153 CDD:227410 44/149 (30%)
UQ_con 8..149 CDD:278603 41/142 (29%)
UBA_II_E2_UBCD4 163..198 CDD:270574
UBE2IXP_005255597.1 COG5078 1..137 CDD:227410 42/143 (29%)
UQ_con 8..137 CDD:278603 39/136 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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