DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and UBE2B

DIOPT Version :10

Sequence 1:NP_524010.2 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_003328.1 Gene:UBE2B / 7320 HGNCID:12473 Length:152 Species:Homo sapiens


Alignment Length:156 Identity:48/156 - (30%)
Similarity:83/156 - (53%) Gaps:9/156 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPET 65
            |:..|..|:.|:||.:.....:.......|.....|..:   |.||..||:|.|.|.|.|:..|.
Human     1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAV---IFGPEGTPFEDGTFKLVIEFSEE 62

  Fly    66 YPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130
            ||..||.|||:::::|||:.: .|:||||||::.|:....:.::|.|:|:||....|:.|.::..
Human    63 YPNKPPTVRFLSKMFHPNVYA-DGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQA 126

  Fly   131 AYQF---KDKYD--LFLLTAKHWTNA 151
            |..:   |.:|:  :..:..:.|.::
Human   127 AQLYQENKREYEKRVSAIVEQSWNDS 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_524010.2 UBCc_UBE2K 6..151 CDD:467420 46/149 (31%)
UBA_II_E2_UBCD4 163..198 CDD:270574
UBE2BNP_003328.1 UBCc_UBE2A_2B 3..145 CDD:467410 46/145 (32%)
Blue background indicates that the domain is not in the aligned region.

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