DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and Ube2g1

DIOPT Version :9

Sequence 1:NP_001287013.1 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_073181.1 Gene:Ube2g1 / 64631 RGDID:620392 Length:170 Species:Rattus norvegicus


Alignment Length:123 Identity:42/123 - (34%)
Similarity:66/123 - (53%) Gaps:21/123 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LVNDS----WTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAI 91
            |::|:    |..|   |.|||||.||||.|...:..|:.||..|||::|||.|||||:.. .|.:
  Rat    29 LIDDNDLYRWEVL---IIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK-NGDV 89

  Fly    92 CLDIL-------------KDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKD 136
            |:.||             ::.|....|:.|:::|:.::||....|.|.:...|.::::
  Rat    90 CISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRE 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_001287013.1 COG5078 1..153 CDD:227410 42/123 (34%)
UQ_con 8..149 CDD:278603 42/123 (34%)
UBA_II_E2_UBCD4 163..198 CDD:270574
Ube2g1NP_073181.1 UQ_con 10..161 CDD:395127 42/123 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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