DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc4 and ube2ka

DIOPT Version :9

Sequence 1:NP_001287013.1 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001013500.1 Gene:ube2ka / 541355 ZFINID:ZDB-GENE-050320-48 Length:200 Species:Danio rerio


Alignment Length:199 Identity:134/199 - (67%)
Similarity:163/199 - (81%) Gaps:0/199 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPET 65
            |||:||.|||||||||::|||..:..||::||::::||||||||||||||||||::.||||:|||
Zfish     1 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPET 65

  Fly    66 YPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130
            ||||||||||||:|||||||||||||||||||..|||||||||||||||||||||||||||||||
Zfish    66 YPFNPPKVRFITKIWHPNISSVTGAICLDILKGQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130

  Fly   131 AYQFKDKYDLFLLTAKHWTNAYAGGPHTFPDCDSKIQRLRDMGIDEHEARAVLSKENWNLEKATE 195
            |.|:|...::|..||:.|::..||.|.:.|:...||.:|..||.|::.....||.::|::|.|||
Zfish   131 ANQYKQNPEMFKQTARLWSHVCAGAPVSSPEYTRKIDKLCAMGFDKNAVIVALSSKSWDVEAATE 195

  Fly   196 GLFS 199
            .|.|
Zfish   196 LLLS 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_001287013.1 COG5078 1..153 CDD:227410 115/151 (76%)
UQ_con 8..149 CDD:278603 109/140 (78%)
UBA_II_E2_UBCD4 163..198 CDD:270574 13/34 (38%)
ube2kaNP_001013500.1 COG5078 1..148 CDD:227410 114/146 (78%)
UBCc 6..148 CDD:238117 110/141 (78%)
UBA_like_SF 163..200 CDD:304366 15/37 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596840
Domainoid 1 1.000 228 1.000 Domainoid score I2423
eggNOG 1 0.900 - - E2759_KOG0418
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3903
Inparanoid 1 1.050 263 1.000 Inparanoid score I3075
OMA 1 1.010 - - QHG57104
OrthoDB 1 1.010 - - D1418652at2759
OrthoFinder 1 1.000 - - FOG0003491
OrthoInspector 1 1.000 - - otm26266
orthoMCL 1 0.900 - - OOG6_103192
Panther 1 1.100 - - LDO PTHR24068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4349
SonicParanoid 1 1.000 - - X2383
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.