DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ubc4 and Ubc84D

DIOPT Version :9

Sequence 1:	NP_001287013.1	Gene:	Ubc4 / 39133	FlyBaseID:	FBgn0015321	Length:	199	Species:	Drosophila melanogaster
Sequence 2:	NP_524260.1	Gene:	Ubc84D / 40900	FlyBaseID:	FBgn0017456	Length:	153	Species:	Drosophila melanogaster

Alignment Length:	153	Identity:	51/153 - (33%)
Similarity:	79/153 - (51%)	Gaps:	11/153 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 AVSRIKREFKEVMRSEEIVQCSIKIELVNDS---WTELRGEIAGPPDTPYEGGKFVLEIKVPETY 66
            |..|:.||..:::.::  :.....||..::|   ||.|    ..|...||..|.|.:||..|..|
  Fly     3 ATRRLTRELSDLVEAK--MSTLRNIESSDESLLMWTGL----LVPEKAPYNKGAFRIEINFPPQY 61

  Fly    67 PFNPPKVRFITRIWHPNISSVTGAICLDILK-DNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVV 130
            ||.|||:.|.|:|:|||:.. .|.:||.|:. |||........||.:|.|::...||:.|..:.:
  Fly    62 PFMPPKILFKTKIYHPNVDE-KGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDL 125

  Fly   131 AYQFKDKYDLFLLTAKHWTNAYA 153
            |.:|..::..|:.||:.:|...|
  Fly   126 AEEFVREHKKFMKTAEEFTKKNA 148

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ubc4	NP_001287013.1	COG5078	1..153	CDD:227410	50/151 (33%)
		UQ_con	8..149	CDD:278603	48/144 (33%)
		UBA_II_E2_UBCD4	163..198	CDD:270574
Ubc84D	NP_524260.1	COG5078	1..150	CDD:227410	51/153 (33%)
Ubc84D	NP_524260.1	UBCc	6..149	CDD:214562	50/150 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24068
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100