DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and Ubc2

DIOPT Version :10

Sequence 1:NP_524010.2 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_477137.1 Gene:Ubc2 / 34487 FlyBaseID:FBgn0015320 Length:232 Species:Drosophila melanogaster


Alignment Length:152 Identity:64/152 - (42%)
Similarity:87/152 - (57%) Gaps:10/152 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFN 69
            :..||::|..|: ..:....||...:  .|:..|....|.|||.:.||||.|.|:|.....|||.
  Fly    87 SAKRIQKELAEI-TLDPPPNCSAGPK--GDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFK 148

  Fly    70 PPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQF 134
            ||||.|.|||:|.||:| .|.||||||||||:.|:|:..||||:.:||....|.||....:|.|:
  Fly   149 PPKVTFRTRIYHCNINS-QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY 212

  Fly   135 ---KDKYDLFLLTAKHWTNAYA 153
               ::::|..   |:.||..||
  Fly   213 LQNREEHDRI---ARLWTKRYA 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_524010.2 UBCc_UBE2K 6..151 CDD:467420 62/147 (42%)
UBA_II_E2_UBCD4 163..198 CDD:270574
Ubc2NP_477137.1 PHA03247 <4..158 CDD:223021 28/73 (38%)
UBCc_UBE2E 89..229 CDD:467413 62/146 (42%)
Blue background indicates that the domain is not in the aligned region.

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