DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc4 and CG8188

DIOPT Version :10

Sequence 1:NP_524010.2 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_573237.2 Gene:CG8188 / 32751 FlyBaseID:FBgn0030863 Length:209 Species:Drosophila melanogaster


Alignment Length:184 Identity:51/184 - (27%)
Similarity:93/184 - (50%) Gaps:21/184 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NMAVSRIKREFKEVMRSEEIVQCSIKIELVNDS-WTELRGEIAGPPDTPYEGGKFVLEIKVPETY 66
            |::...|::..:|:...|......||: |:|:| .|:::..|.||..|||..|.|.:::.:.:.:
  Fly    10 NLSPQTIRQVMRELQEMETTPPEGIKV-LINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDF 73

  Fly    67 PFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131
            |..|||..|:|:|:|||::: .|.||::.||.:|...:.::.:||:::.||....|:...:....
  Fly    74 PLTPPKAYFLTKIFHPNVAA-NGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAG 137

  Fly   132 YQFKDKYDLFLLTAKHWTNAYA----------------GGPHT--FPDCDSKIQ 167
            ....::||.:...|:..|..:|                |||.|  ....|.|:|
  Fly   138 KMLLERYDDYSQRARMMTEIHAQPAKCGVGAVGDAKDDGGPSTKKHAGLDKKLQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc4NP_524010.2 UBCc_UBE2K 6..151 CDD:467420 42/145 (29%)
UBA_II_E2_UBCD4 163..198 CDD:270574 3/5 (60%)
CG8188NP_573237.2 UBCc_UBE2S 13..158 CDD:467424 42/146 (29%)

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