DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prps and prps1

DIOPT Version :9

Sequence 1:NP_729528.2 Gene:Prps / 39132 FlyBaseID:FBgn0036030 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_989140.1 Gene:prps1 / 394745 XenbaseID:XB-GENE-1008569 Length:318 Species:Xenopus tropicalis


Alignment Length:340 Identity:281/340 - (82%)
Similarity:299/340 - (87%) Gaps:23/340 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 MPNIKVFSGTSHPDLAQRIVDRLGIDLGKVVTKKFSNLETCVEIGESVRGEDVYIVQSGSGEIND 112
            |||||:|||:||.||:|:|.||||::||:||||||||.|||||||||||||||||||||.|||||
 Frog     1 MPNIKIFSGSSHQDLSQKIADRLGLELGRVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIND 65

  Fly   113 NLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKLAGSEDNAESKKLAKKNYDWKFRSRAPI 177
            |||||||||||||||||.|||||||||||||||||||                       |||||
 Frog    66 NLMELLIMINACKIASACRVTAVIPCFPYARQDKKDK-----------------------SRAPI 107

  Fly   178 SAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIKENIPEWKNSIIVSPDA 242
            ||||||||||||||||||||||||||||||||||||||||||||||||:|||||||...||||||
 Frog   108 SAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENIPEWKTCTIVSPDA 172

  Fly   243 GGAKRVTSIADRLNVEFALIHKERKKANEVASMVLVGDVKDKIAILVDDMADTCGTIVHAADRLV 307
            |||||||||||||||:||||||||||||||..||||||||||:||||||||||||||.||||:|:
 Frog   173 GGAKRVTSIADRLNVDFALIHKERKKANEVDRMVLVGDVKDKVAILVDDMADTCGTICHAADKLL 237

  Fly   308 EAGATKVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQDGHMRDCPKIQCIDVSMMFAEAVRR 372
            .|||||||||||||||||||||||||||||||||||||||:..:|.|.|||.||:||:.|||:||
 Frog   238 SAGATKVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEEKIRHCSKIQVIDISMILAEAIRR 302

  Fly   373 THNGESVSYLFSNVP 387
            ||||||||||||:||
 Frog   303 THNGESVSYLFSHVP 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrpsNP_729528.2 PrsA 48..383 CDD:223538 276/334 (83%)
prps1NP_989140.1 PrsA 1..313 CDD:223538 276/334 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I3029
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 550 1.000 Inparanoid score I1122
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1043963at2759
OrthoFinder 1 1.000 - - FOG0000593
OrthoInspector 1 1.000 - - otm48224
Panther 1 1.100 - - O PTHR10210
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X462
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

Return to query results.
Submit another query.