DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prps and Pdha1

DIOPT Version :9

Sequence 1:NP_729528.2 Gene:Prps / 39132 FlyBaseID:FBgn0036030 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_032836.1 Gene:Pdha1 / 18597 MGIID:97532 Length:390 Species:Mus musculus


Alignment Length:30 Identity:11/30 - (36%)
Similarity:15/30 - (50%) Gaps:7/30 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 DHIITMDLHASQIQGFF---DIPVDNLYAE 218
            ||:||    |.:..||.   .:||..:.||
Mouse   112 DHLIT----AYRAHGFTFTRGLPVRAILAE 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrpsNP_729528.2 PrsA 48..383 CDD:223538 11/30 (37%)
Pdha1NP_032836.1 PDH_E1_alph_y 58..370 CDD:274473 11/30 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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