DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16719 and Spef1

DIOPT Version :10

Sequence 1:NP_648344.1 Gene:CG16719 / 39131 FlyBaseID:FBgn0036029 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_006235095.1 Gene:Spef1 / 311429 RGDID:1311267 Length:335 Species:Rattus norvegicus


Alignment Length:317 Identity:79/317 - (24%)
Similarity:127/317 - (40%) Gaps:76/317 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENEQQNDLNQWLKEQRIILDLKAR---RSFSDVLPVAKIVKRSHPRLVDLHNYTPKSSVALKLQ 62
            ::.|..:.|..|:  ..|.|....|   |.|||.:.||:::|...|::|::|||.|.:|:..||.
  Rat     5 VDEEALHQLYLWV--DNIPLSRPKRNLSRDFSDGVLVAELIKFYFPKMVEMHNYVPANSLQQKLS 67

  Fly    63 SWQTFNQKVLKKLGINLTRSELEQLASAAPGAIESLFHELIAVTKCASPRPRPRLSVSPTSSQKS 127
            :|...|:|||.||..::....:.::|..:||.:|.:   ||.:.:....|.| |..:...|.|:.
  Rat    68 NWGHLNRKVLNKLNFSVPDDVMRKIAQCSPGVVELV---LIPLRQRLEERQR-RQKLGVGSLQEL 128

  Fly   128 V-------VIKKLANKNSVVRTLNRSLTQVIERSCSIDSQP----QVLTMDVNVVVNGQMKKVSK 181
            |       :...|:.|   ||....:|.:.:.....:..:|    |.|..|.|.|:         
  Rat   129 VPQDSSGYMDMGLSQK---VRGDAPTLGEQLREGHPLAPRPPGYNQALQGDPNFVL--------- 181

  Fly   182 KVVEYEHYANAIRESAEKSRYINSIAERANHLENTIALKNERID--------------------- 225
            ::.|.|....|.:|:      :..:..:...||:.:.|||.|||                     
  Rat   182 QIAEKEQELLASQET------VQVLQMKVKRLEHLLQLKNVRIDDLSRRLQQAERKQRKKDHFPQ 240

  Fly   226 ----VLLHQMAKLSVSILSMP------------HT-LNGTDDDTELQSRSDNAAEPC 265
                |..|.|....||.|.:|            || ..|:....|....|.:|..||
  Rat   241 PRKPVRTHLMTSQIVSSLKLPALGLERRSSGSFHTPRTGSFLSIEDSFISVHAKSPC 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16719NP_648344.1 CH_2 9..99 CDD:461871 32/92 (35%)
Spef1XP_006235095.1 CH_2 13..104 CDD:461871 32/95 (34%)

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