DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and TUB2

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_116616.1 Gene:TUB2 / 850506 SGDID:S000001857 Length:457 Species:Saccharomyces cerevisiae


Alignment Length:463 Identity:186/463 - (40%)
Similarity:271/463 - (58%) Gaps:27/463 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSAND-ARTFF 64
            |||::.|..||||.|||.|.||....|||::.:|:..              |||....: ...:|
Yeast     1 MREIIHISTGQCGNQIGAAFWETICGEHGLDFNGTYH--------------GHDDIQKERLNVYF 51

  Fly    65 TETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRV 129
            .|..:||.|||||.|||||..||.|||..:..|:.|:..|.|:..|.|.:|:|.|:.|.|::|.|
Yeast    52 NEASSGKWVPRSINVDLEPGTIDAVRNSAIGNLFRPDNYIFGQSSAGNVWAKGHYTEGAELVDSV 116

  Fly   130 TSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVE 194
            ...:::.||.|||||||.|.||||||||||..:||:.::..::..:....|:|.||||.|..|||
Yeast   117 MDVIRREAEGCDSLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVLPSPKTSDTVVE 181

  Fly   195 PYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSM 259
            ||||.|:.|..::|||..|.:||||:||||..:|.:::|:|.:||.|::.::|..|.|||:.|.:
Yeast   182 PYNATLSVHQLVEHSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTTSLRYPGQL 246

  Fly   260 NVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFM 324
            |.||.:...|||||||:||.:|.||||.:....:.....:..||...|::.|||...|||.|:::
Yeast   247 NSDLRKLAVNLVPFPRLHFFMVGYAPLTAIGSQSFRSLTVPELTQQMFDAKNMMAAADPRNGRYL 311

  Fly   325 ACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDG-DLAKTSRACCM 388
            .....:||.|..|:|...:..::||....||:|.|...:..:    .:..|.| |:|.|     .
Yeast   312 TVAAFFRGKVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAV----CSVAPQGLDMAAT-----F 367

  Fly   389 LSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEE 453
            ::|:|:|...|..:..:|..|||::||:|||..|||:|.||:||..|:..|..::::......|:
Yeast   368 IANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDELEFSEAESNMNDLVSEYQQYQEATVED 432

  Fly   454 GGDEDFDE 461
              ||:.||
Yeast   433 --DEEVDE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 180/445 (40%)
TUB2NP_116616.1 beta_tubulin 2..426 CDD:276956 180/446 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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