DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and Tubg2

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_038942746.1 Gene:Tubg2 / 680991 RGDID:1585798 Length:477 Species:Rattus norvegicus


Alignment Length:409 Identity:120/409 - (29%)
Similarity:221/409 - (54%) Gaps:37/409 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 TETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKE--DAANNYARGRYSIGKEVID 127
            |...:...:||::.:||||.||..:.|....:||:||.:...:.  .|.||:||| :|.|:::.:
  Rat    79 TRADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWARG-FSQGEKIHE 142

  Fly   128 RVTSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPS-PKVSTA 191
            .:...:.:.|:..|||:||::.||:.||||||..|.|:|||:..|.||....::|:|: .::|..
  Rat   143 DIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDV 207

  Fly   192 VVEPYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFS 256
            ||:|||:|||......::|||.::||.|:..|..:.|.:..|::..:|:|::.|:|::|.:||:.
  Rat   208 VVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYP 272

  Fly   257 GSMNVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAH-EQHAITTLTNACFESSNMMVKCDPRA 320
            |.||.||.....:|:|.||:||.:..|.||.:.:..|. .:..:..:.....:..|:||.    .
  Rat   273 GYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVS----T 333

  Fly   321 GK-------FMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGD 378
            |:       ::|...:.:|:|.|..|:.::..|:.::...|:.|.|...::.::.:.| ::|...
  Rat   334 GRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSP-YLPSAH 397

  Fly   379 LAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDF 443
            ..    :..|::|.|:||..|.:...::|.::|:.||:..:..|.              :.:.:|
  Rat   398 RV----SGLMMANHTSISSLFESSCQQYDKLWKRGAFLEQFRKED--------------IFKDNF 444

  Fly   444 EEVGLDNAEEGGDEDFDEF 462
            ||  :|.:.|...|..||:
  Rat   445 EE--MDRSREVVQELIDEY 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 114/391 (29%)
Tubg2XP_038942746.1 gamma_tubulin 81..461 CDD:276957 118/405 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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