DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tubb2b

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001032487.2 Gene:tubb2b / 641421 ZFINID:ZDB-GENE-030131-722 Length:472 Species:Danio rerio


Alignment Length:461 Identity:181/461 - (39%)
Similarity:269/461 - (58%) Gaps:23/461 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |||:|.:|.||||.|||...||:...||||:..|        |..|.|     |...:....::.
Zfish    28 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTG--------TYHGDS-----DLQLDRINVYYN 79

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |...||.|||::.|||||..:|.||:|...:::.|:..:.|:..|.||:|:|.|:.|.|::|.|.
Zfish    80 EASGGKYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 144

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            ..::|.||.||.||||.:.||||||||||..:||:.::..:|..:....|:|.||||||..||||
Zfish   145 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 209

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            |||.|:.|..::::|..:.:||||:||||..:|.:..|:|.:||.|::..:|..|..|||.|.:|
Zfish   210 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCLRFPGQLN 274

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            .||.:...|:|||||:||.:..:|||.|.....:....:..||...|::.|||..||||.|:::.
Zfish   275 ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLT 339

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            ...::||.:..|:|:..:..:::|....||:|.|...|..:     ..:|...|   ..|...:.
Zfish   340 VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV-----CDIPPRGL---KMAATFIG 396

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455
            |:|||...|..:|.:|..||:::||:|||.||||:|.|||||..|:..|..::::.....|||.|
Zfish   397 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEG 461

  Fly   456 DEDFDE 461
              :|:|
Zfish   462 --EFEE 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 174/443 (39%)
tubb2bNP_001032487.2 PLN00220 28..457 CDD:215107 175/449 (39%)
beta_tubulin 29..453 CDD:276956 174/444 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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