DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tuba4a

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_012825888.1 Gene:tuba4a / 549448 XenbaseID:XB-GENE-489927 Length:452 Species:Xenopus tropicalis


Alignment Length:460 Identity:315/460 - (68%)
Similarity:384/460 - (83%) Gaps:14/460 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTE 66
            ||.:|:.:||.|:|:||||||||.|||||..||.:.:  :.|..|     |.|:..    |||:|
 Frog     5 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPS--DKTIGG-----GDDSFT----TFFSE 58

  Fly    67 TGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTS 131
            ||.||.|||::||||||||||:||.|..|:|:||||||:||||||||||||.|:||||:||.|..
 Frog    59 TGAGKHVPRAVFVDLEPTVIDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 123

  Fly   132 RLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPY 196
            |::|:|:||..|||||:|||.||||||||||||:||||.||.||.||:|::||:|:|||||||||
 Frog   124 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 188

  Fly   197 NALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNV 261
            |::||||:|::||||.||||||||||||..:|.::||.|.||||||:|||||.||||||.|::||
 Frog   189 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNV 253

  Fly   262 DLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMAC 326
            ||.||||||||:|||||||..|||::|||::.|||.:::.:||||||.:|.|||||||.||:|||
 Frog   254 DLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMAC 318

  Fly   327 CMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSN 391
            |:||||||||||||||::|||:||.||||||||||||:||||:.|..||.|||||..||.|||||
 Frog   319 CLLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSN 383

  Fly   392 TTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGD 456
            ||||:.|::.|.:|||||:.||||||||||||||||||:||||::|.||:|:||||:|:.|   |
 Frog   384 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYE---D 445

  Fly   457 EDFDE 461
            ||..|
 Frog   446 EDEGE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 306/443 (69%)
tuba4aXP_012825888.1 PTZ00335 5..442 CDD:185562 309/447 (69%)

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