DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tuba8l3

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001003558.1 Gene:tuba8l3 / 445164 ZFINID:ZDB-GENE-040801-77 Length:450 Species:Danio rerio


Alignment Length:462 Identity:318/462 - (68%)
Similarity:382/462 - (82%) Gaps:12/462 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |||.:|:.:||.|.|:||||||||.|||||..||.:.:.:.:.        |.|.|.|   |||:
Zfish     1 MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIG--------GGDDSFN---TFFS 54

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |||.||.|||:|||||||||||:||.|..|:|:||||||:||||||||||||.|:||||:||.|.
Zfish    55 ETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVL 119

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            .|.:|:|:||..|||||||||.||||||||||||:||||.||.||.||:||:||:|:||||||||
Zfish   120 DRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEP 184

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            ||::||||:|::||||.||||||||||||..:|.::||.|.||||||.|||||.||||||.|::|
Zfish   185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRKNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            |||.||||||||:|||||||..|||::|||::.|||.::..:||||||.||.|||||||.||:||
Zfish   250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPSNQMVKCDPRHGKYMA 314

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            ||:||||||||||||:|::|||:||.||||||||||||:||||:.|..||.|||||..||.||||
Zfish   315 CCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455
            |||||:.|::.|.:|||||:.||||||||||||||||||:||||::|.||:|:||||.|:..| .
Zfish   380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSMGE-E 443

  Fly   456 DEDFDEF 462
            ||:.:|:
Zfish   444 DEEGEEY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 309/443 (70%)
tuba8l3NP_001003558.1 PTZ00335 1..439 CDD:185562 313/448 (70%)
alpha_tubulin 2..435 CDD:276955 309/443 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.720

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