DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and betaTub97EF

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster


Alignment Length:464 Identity:180/464 - (38%)
Similarity:271/464 - (58%) Gaps:24/464 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |||:|.:|.||||.|||:..||:...||||:.:|..        .|.|| :.|:.    ...::.
  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYY--------HGESA-LQHER----IDVYYN 52

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |..:||.|||::.:||||..:|.||...:.:|:.|:..:.|:..|.||:|:|.|:.|.|:||.|.
  Fly    53 EASSGKYVPRAVLIDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVL 117

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            ..|:|.:|.||.||||.:.||||||||||..:||:.::..:|..:....|:|.||||||..||||
  Fly   118 EVLRKESEGCDCLQGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEP 182

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            |||.|:.|..::::|..|.:||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:|
  Fly   183 YNATLSIHQLVENTDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLN 247

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            .||.:...|:|||||:||.:..:|||.:.....:....:..||...|::.|||..||||.|:::.
  Fly   248 ADLRKLAVNMVPFPRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLT 312

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            ...::||.:..|:|:..:..::||....||:|.|...|:.:     ..:|...|   ..:...:.
  Fly   313 VACIFRGPMSMKEVDTQMYNVQSKNSSYFVEWIPNNVKVAV-----CDIPPRGL---KMSATFIG 369

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVL---ERDFEEVGLDNAE 452
            |:|||...|..:|.:|..||:::||:|||.||||:|.|||||..|:..|   .:.::|...|:..
  Fly   370 NSTAIQEIFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEV 434

  Fly   453 EGGDEDFDE 461
            |..||..::
  Fly   435 EFDDEQAEQ 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 174/446 (39%)
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 180/464 (39%)
beta_tubulin 2..426 CDD:276956 174/444 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443476
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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