DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub67C and tuba7l

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_021334828.1 Gene:tuba7l / 431777 ZFINID:ZDB-GENE-040704-78 Length:468 Species:Danio rerio


Alignment Length:462 Identity:313/462 - (67%)
Similarity:377/462 - (81%) Gaps:15/462 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 REVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDA--RTFF 64
            ||.:|:.:||.|:||||||||||.|||||..||.:.:             .|.||..|.  .|||
Zfish    20 RECISVHVGQAGVQIGNACWELYCLEHGIQADGHMPS-------------DHTTSGGDQSFNTFF 71

  Fly    65 TETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRV 129
            :|||.||.|||::||||||||:|:||.|..|:|:||||||:||||||||||||.|:||||::|.|
Zfish    72 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 136

  Fly   130 TSRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVE 194
            ..|::|:.:||..|||||||||.||||||||.|||:||||.||.||.||:|||||:|:|||||||
Zfish   137 LDRVRKLCDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKAKLEFAVYPAPQVSTAVVE 201

  Fly   195 PYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSM 259
            |||::||||:|::||||.||||||||||||..:|.::||.|.||||||.|||||.||||||.|::
Zfish   202 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 266

  Fly   260 NVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFM 324
            ||||.||||||||:||||||||.|||::|||::.|||.::..:||||||.:|.|||||||.||:|
Zfish   267 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVVEITNACFEPANQMVKCDPRHGKYM 331

  Fly   325 ACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCML 389
            ||||||||||||||||||:.:||:||.||||||||||||:||||:.|..||.|||||..||.|||
Zfish   332 ACCMLYRGDVVPKDVNAAIGSIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 396

  Fly   390 SNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEG 454
            ||||||:.|::.|.:|||||:.||||||||||||||||||.||||::|.||:|:||||:|..:..
Zfish   397 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGVDTIDGE 461

  Fly   455 GDEDFDE 461
            |:.:.:|
Zfish   462 GEAEGEE 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 307/445 (69%)
tuba7lXP_021334828.1 PTZ00335 20..459 CDD:185562 311/451 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.