DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tubal3

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_998847.1 Gene:tubal3 / 407878 XenbaseID:XB-GENE-490055 Length:450 Species:Xenopus tropicalis


Alignment Length:462 Identity:314/462 - (67%)
Similarity:387/462 - (83%) Gaps:12/462 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |||.:|:.:||.|:|:||||||||.||||:..||.:.:::..|...||..           |||:
 Frog     1 MRECISVHVGQAGVQMGNACWELYCLEHGLQPDGIMPSEKSATMVDSSFG-----------TFFS 54

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |||:||.|||::|||||.||||:||.|..|.|:||||||:||||||||||||.|:||||:||.|.
 Frog    55 ETGSGKHVPRAVFVDLEQTVIDEVRTGPYRSLFHPEQLITGKEDAANNYARGHYTIGKELIDSVL 119

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            .|::|:|:||..|||||:|||.||||||||||||:||||.||.||.||:|:|||:|::|||||||
 Frog   120 DRVRKMADQCSGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPRISTAVVEP 184

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            ||::||||:|::||||.|||||||||||||.:|.::||:|.||||||||||||.||||||.|::|
 Frog   185 YNSILTTHTTLEHSDCAFMVDNEAIYDICNRNLDIERPSYTNLNRLIAQIVSSITASLRFDGALN 249

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            |||.||||||||:||||||||.|:|::|||::.|||.::..:||||||.||.|||||||.||:||
 Frog   250 VDLTEFQTNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVPEITNACFEYSNQMVKCDPRRGKYMA 314

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            ||:||||||||||||||::|||::|.||||||||||||:||||:.|..||.|||||..||.||||
 Frog   315 CCLLYRGDVVPKDVNAAIAAIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455
            |||||:.|::.|..|||||:.||||||||||||||||||:||||::|.||:|:||||.::. |||
 Frog   380 NTTAIAEAWARLDNKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGREST-EGG 443

  Fly   456 DEDFDEF 462
            :::.||:
 Frog   444 EDEEDEY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 305/443 (69%)
tubal3NP_998847.1 PTZ00335 1..439 CDD:185562 309/448 (69%)

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