DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tubb4a

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001032345.1 Gene:tubb4a / 394927 XenbaseID:XB-GENE-947407 Length:444 Species:Xenopus tropicalis


Alignment Length:461 Identity:181/461 - (39%)
Similarity:267/461 - (57%) Gaps:24/461 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |||:|.:|.||||.|||...||:...||||:..|        |..|.|     |........::.
 Frog     1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTG--------TYHGDS-----DLQLERINVYYN 52

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |...||.|||::.|||||..:|.||:|...:::.|:..:.|:..|.||:|:|.|:.|.|::|.|.
 Frog    53 EASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVM 117

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            ..::|.:|.||.||||.:.||||||||||..:||:.::..:|..:....|:|.||||||..||||
 Frog   118 DVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            |||.|:.|..::::|..:.:||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:|
 Frog   183 YNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLN 247

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            .||.:...|:|||||:||.:..:|||.|.....:....:..||...|:|.|||..||||.|:::.
 Frog   248 ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDSKNMMAACDPRHGRYLT 312

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            ...::||.:..|:|:..:..:::|....||:|.|...|..:     ..:|...|   ..|...:.
 Frog   313 VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV-----CDIPPRGL---KMAATFIG 369

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455
            |:|||...|..:|.:|..||:::||:|||.||||:|.|||||..|:..|..::::.....|||| 
 Frog   370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEG- 433

  Fly   456 DEDFDE 461
              :|:|
 Frog   434 --EFEE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 174/443 (39%)
tubb4aNP_001032345.1 PLN00220 1..427 CDD:215107 175/446 (39%)

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