DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and tuba8l4

DIOPT Version :10

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_956479.1 Gene:tuba8l4 / 393154 ZFINID:ZDB-GENE-040426-860 Length:450 Species:Danio rerio


Alignment Length:462 Identity:313/462 - (67%)
Similarity:380/462 - (82%) Gaps:12/462 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFT 65
            |||.:|:.:||.|.|:||||||||.|||||..||.:.:.:.:.        |.|.|.|   |||:
Zfish     1 MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIG--------GGDDSFN---TFFS 54

  Fly    66 ETGNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVT 130
            |||.||.|||::|||||||||::||.|..|:|:||||||:||||||||||||.|:.|||:||.|.
Zfish    55 ETGAGKHVPRAVFVDLEPTVINEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTTGKEIIDLVL 119

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEP 195
            .|.:|:|:||..|||||||||.||||||||||||:||||.||.||.||:|||||:|:||||||||
Zfish   120 DRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEP 184

  Fly   196 YNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMN 260
            ||::||||:|::||||.||||||||||||..:|.::||.|.||||||.|||||.||||||.|::|
Zfish   185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249

  Fly   261 VDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMA 325
            |||.||||||||:|||||||..|||::|||::.|||.::..:||||||.:|.|||||||.||:||
Zfish   250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPANQMVKCDPRHGKYMA 314

  Fly   326 CCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLS 390
            ||:||||||||||||:|::.||:||.||||||||||||:||||:.|..||.|||||..||.||||
Zfish   315 CCLLYRGDVVPKDVNSAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379

  Fly   391 NTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGG 455
            |||||:.|::.|.:||||::.||||||||||||||||||:||||::|.||:|:||||.|:..| .
Zfish   380 NTTAIAEAWARLDHKFDLVYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSVGE-E 443

  Fly   456 DEDFDEF 462
            ||:.:|:
Zfish   444 DEEGEEY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 304/443 (69%)
tuba8l4NP_956479.1 PTZ00335 1..440 CDD:185562 309/449 (69%)

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