DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub67C and gammaTub37C

DIOPT Version :9

Sequence 1:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster


Alignment Length:453 Identity:140/453 - (30%)
Similarity:244/453 - (53%) Gaps:30/453 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EVVSIQIGQCGIQIGNACWELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTET 67
            |::::|:||||.|||...|:...|||||:.||.|:         ..|:.|.|..    ..||.:.
  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLE---------DFATDGQDRK----DVFFYQA 55

  Fly    68 GNGKQVPRSIFVDLEPTVIDDVRNGCMRELYHPEQLISGKE--DAANNYARGRYSIGKEVIDRVT 130
            .:...:||::.:||||.||:::......:||:.|.:...|.  .|.||:|.| :|.|::|.:.|.
  Fly    56 DDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVF 119

  Fly   131 SRLQKIAEQCDSLQGFLIFHSLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPS-PKVSTAVVE 194
            ..|.:.|:..|||:||::.||:.||||||..|.::||||..:.||....::|:|: .::|..||:
  Fly   120 DILDREADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQ 184

  Fly   195 PYNALLTTHSTMDHSDCVFMVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSM 259
            |||::||.......:|.|.::||.|:..|....|.:..|.:..:|.|::.|:|.:|.:||:...|
  Fly   185 PYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYM 249

  Fly   260 NVDLNEFQTNLVPFPRIHFPLVAYAPLMS--AERSAHEQHAITTLTNACFESSNMMVKC--DPRA 320
            |.:|.....:|:|.|::||.:..|.||||  ..:::..:..:..:.....:..||||..  |.::
  Fly   250 NNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQS 314

  Fly   321 GK-FMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSR 384
            .: |::...:.:|:|.|..|:.::..|:.::...|:.|.|...::.:....| :|....  |.|.
  Fly   315 RQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSP-YVQSAH--KVSG 376

  Fly   385 ACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTE---ARENIAVLERDFE 444
              .|::|.|.||..|.....::|.:.|:.||:..:..|.|.:.:.||   ||:.:..|.:::|
  Fly   377 --LMMANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 140/453 (31%)
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 140/453 (31%)
gamma_tubulin 4..436 CDD:276957 139/450 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443472
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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